Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4102 104 3e-17 >seq4102 Length=4342353 Score = 104 bits (114), Expect = 3e-17 Identities = 232/344 (67%), Gaps = 16/344 (5%) Strand=Plus/Plus Query 75884 GCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGT 75943 || ||||||| ||| || || ||||||||||| |||||||||||||| ||| |||| Sbjct 712471 GCCATTCTCAGATCTCAAGGAGAAACTGGAACACCTTATATGCTTTACAAAGATCATTGT 712530 Query 75944 AA-CAAGAAG--AGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACG 76000 || | | || | | ||||| | ||| || || ||||| || ||||| || || Sbjct 712531 AATCGAAAATCAAATCACCAACA---TTTAGGCACTATCAAATGCAGCAATCTGTGTACT 712587 Query 76001 GAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCC 76060 |||||| | || || | | | | || ||||| |||||||| || || ||||| Sbjct 712588 GAAATTGTTGAATATTCTGGTCCTGGGGAAGTTGCTGTGTGCAATTTAGCGTCTATCGCT 712647 Query 76061 CTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATC 76120 || | || ||||||| ||| || ||||| |||| || |||||| | | | Sbjct 712648 GTTAATATGTTTGTCAATACAGACACCAAAACTTTCGATTTCGATAAACTTAAAACAGTG 712707 Query 76121 ACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC---CGTT 76177 |||| || ||||| |||||| | |||||| ||| ||||||||||| | Sbjct 712708 GCAAAAATCGTTACTCGTAATCTAGATAAAGTCATCGACGTTAATTTTTATCCTATCCCA 712767 Query 76178 GAGACTGCGCGAAAG--TCTAATATGCGACACAGACCTATTGGT 76219 |||| |||||| |||||| |||||||||||||||| Sbjct 712768 GAGA-----CGAAAGCATCTAATCAAAAACACAGACCTATTGGT 712806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596051248131680