Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq68007 141 2e-28 seq5117 131 3e-25 >seq68007 Length=840 Score = 141 bits (156), Expect = 2e-28 Identities = 141/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || || ||||| | || ||| || |||| ||||| || || || ||||| | | Sbjct 422 ATGTTGTAATCGGAAAGAGTCCTACCGTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGC 363 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||||||||| || ||||||||||||||||||||||||| ||||| ||| || ||| Sbjct 362 TGTTGATCAGGTGGGATTCCTTCTTTATCTTGTATTTTGGCTTTTACGTTTTCTATGGTA 303 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || |||| |||||||| || || || ||||| || || || || || ||||| |||||| Sbjct 302 TCCGAAGCTTCAACTTCAAGGGTAATTGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGC 243 Query 193359 ATT 193361 ||| Sbjct 242 ATT 240 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| | || || |||||||| | ||| | || || ||| || Sbjct 249 AATTTGCATTCCTCCTCGAAGGCGCAGAACCAGATGAAGTGTTGATTCCTTTTGAATGTT 190 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||||||| | ||||| ||| || | |||||| || |||||||| || | ||||| Sbjct 189 ATAGTCGGAAAGAGTTCTGCCATCCTCCAGTTGTTTGCCAGCAAAAATCAAACGTTGTTG 130 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || ||||| ||||| || || ||||||| || | |||| || || || || Sbjct 129 ATCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGA 70 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| || || || |||||||| || || |||||||| || || ||||| Sbjct 69 AGCTTCAACTTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTTACGAAGATCTGCAT 13 >seq5117 Length=2329582 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || || || |||| ||||||||| | ||||| ||| || || || Sbjct 1165253 ATACCACCACGTAAACGGAGAACCAAATGCAATGTTGATTCTTTCTGAATGTTGTAATCA 1165194 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| |||| ||| || | ||||||||||| || || || ||||| ||||| ||| Sbjct 1165193 GATAGAGTTCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGA 1165134 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| ||||| || ||||||| ||| | ||| || || || || | |||| Sbjct 1165133 GGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCA 1165074 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || || || || || || | ||||| ||||| || ||||| Sbjct 1165073 ACTTCCAATGTGATGGTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1165024 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| ||| || || |||| ||||| || | || || ||||||||| || Sbjct 1167634 ATACCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCT 1167575 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | || || | ||| ||||| ||||| || || ||||| ||||| ||| Sbjct 1167574 GAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGA 1167515 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| || || ||||| | ||| | ||| || || || || | || Sbjct 1167514 GGGATTCCTTCTTTGTCCTGAATTTTAGCTTTAACATTCTCGATCGTGTCTGATGCTTCG 1167455 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || |||||||| || || ||||| ||||| || ||||| Sbjct 1167454 ACTTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGACAAAAATCTGCAT 1167405 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | |||| ||||||||| | ||||| |||||| || || Sbjct 1167406 ATACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCA 1167347 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | || || | |||||||||||||| || |||||||||||||| ||| Sbjct 1167346 GACAATGTGCGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGA 1167287 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||| | || | || || || || |||| ||| Sbjct 1167286 GGAATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCG 1167227 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | || || || || ||||||| ||||| || || || ||||| Sbjct 1167226 ACCTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177 Score = 111 bits (122), Expect = 3e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| ||||| || | || || ||| ||||| || || | || | | || || Sbjct 1167841 ACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGACCGTCTTCG 1167782 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||||||||| ||||| || |||||||||||||| ||||| |||||||| || || || Sbjct 1167781 AGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGA 1167722 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 ||||||| ||| | ||| || || || || | ||||||||| | || || || || Sbjct 1167721 ATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTT 1167662 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||||| ||||| || ||||| Sbjct 1167661 CCCGTCAAAGTTTTGACAAAAATCTGCAT 1167633 Score = 100 bits (110), Expect = 5e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || || || || | || || | ||||||||||||||| || ||||| Sbjct 1167130 AATATTGTAATCAGACAATGTGCGTCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCT 1167071 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| ||||| ||||| || || ||||| ||||| ||||| | || | || || || Sbjct 1167070 CTGCTGATCGGGAGGAATACCCTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGT 1167011 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 || |||| ||| || || | || |||||||| || || || ||||| || || || || Sbjct 1167010 GTCTGAAGCCTCGACCTCCAATGTGATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTG 1166951 Query 193358 CAT 193360 ||| Sbjct 1166950 CAT 1166948 Score = 89.7 bits (98), Expect = 9e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | |||| ||||||||| | ||||| ||| ||||| || Sbjct 1166949 ATACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTCTGAATGTTATAATCA 1166890 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | | ||| || | ||||||||||||||| || |||||||| ||||| ||| Sbjct 1166889 GATAATGTGCGACCATCTTCAAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGA 1166830 Query 193251 GGTATTCCTTCT 193262 || || || ||| Sbjct 1166829 GGAATACCCTCT 1166818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898872701537520