Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq68007 141 2e-28
seq5117 131 3e-25
>seq68007
Length=840
Score = 141 bits (156), Expect = 2e-28
Identities = 141/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || || ||||| | || ||| || |||| ||||| || || || ||||| | |
Sbjct 422 ATGTTGTAATCGGAAAGAGTCCTACCGTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGC 363
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||||||||| || ||||||||||||||||||||||||| ||||| ||| || |||
Sbjct 362 TGTTGATCAGGTGGGATTCCTTCTTTATCTTGTATTTTGGCTTTTACGTTTTCTATGGTA 303
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| |||| |||||||| || || || ||||| || || || || || ||||| ||||||
Sbjct 302 TCCGAAGCTTCAACTTCAAGGGTAATTGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGC 243
Query 193359 ATT 193361
|||
Sbjct 242 ATT 240
Score = 140 bits (154), Expect = 6e-28
Identities = 173/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| || || |||| | || || |||||||| | ||| | || || ||| ||
Sbjct 249 AATTTGCATTCCTCCTCGAAGGCGCAGAACCAGATGAAGTGTTGATTCCTTTTGAATGTT 190
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||||||| | ||||| ||| || | |||||| || |||||||| || | |||||
Sbjct 189 ATAGTCGGAAAGAGTTCTGCCATCCTCCAGTTGTTTGCCAGCAAAAATCAAACGTTGTTG 130
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || ||||| ||||| || || ||||||| || | |||| || || || ||
Sbjct 129 ATCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGA 70
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||| || || || |||||||| || || |||||||| || || |||||
Sbjct 69 AGCTTCAACTTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTTACGAAGATCTGCAT 13
>seq5117
Length=2329582
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | || || || |||| ||||||||| | ||||| ||| || || ||
Sbjct 1165253 ATACCACCACGTAAACGGAGAACCAAATGCAATGTTGATTCTTTCTGAATGTTGTAATCA 1165194
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||| ||| || | ||||||||||| || || || ||||| ||||| |||
Sbjct 1165193 GATAGAGTTCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGA 1165134
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| ||||| || ||||||| ||| | ||| || || || || | ||||
Sbjct 1165133 GGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCA 1165074
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || || || || || | ||||| ||||| || |||||
Sbjct 1165073 ACTTCCAATGTGATGGTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1165024
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||| ||| || || |||| ||||| || | || || ||||||||| ||
Sbjct 1167634 ATACCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCT 1167575
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | || || | ||| ||||| ||||| || || ||||| ||||| |||
Sbjct 1167574 GAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGA 1167515
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||| || || ||||| | ||| | ||| || || || || | ||
Sbjct 1167514 GGGATTCCTTCTTTGTCCTGAATTTTAGCTTTAACATTCTCGATCGTGTCTGATGCTTCG 1167455
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| || |||||||| || || ||||| ||||| || |||||
Sbjct 1167454 ACTTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGACAAAAATCTGCAT 1167405
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || | |||| ||||||||| | ||||| |||||| || ||
Sbjct 1167406 ATACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCA 1167347
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || || | || || | |||||||||||||| || |||||||||||||| |||
Sbjct 1167346 GACAATGTGCGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGA 1167287
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| ||||| ||||| | || | || || || || |||| |||
Sbjct 1167286 GGAATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCG 1167227
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | || || || || ||||||| ||||| || || || |||||
Sbjct 1167226 ACCTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177
Score = 111 bits (122), Expect = 3e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|||| ||||| || | || || ||| ||||| || || | || | | || ||
Sbjct 1167841 ACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGACCGTCTTCG 1167782
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||||||||| ||||| || |||||||||||||| ||||| |||||||| || || ||
Sbjct 1167781 AGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGA 1167722
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
||||||| ||| | ||| || || || || | ||||||||| | || || || ||
Sbjct 1167721 ATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTT 1167662
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||||| ||||| || |||||
Sbjct 1167661 CCCGTCAAAGTTTTGACAAAAATCTGCAT 1167633
Score = 100 bits (110), Expect = 5e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
|||||| || || || || || | || || | ||||||||||||||| || |||||
Sbjct 1167130 AATATTGTAATCAGACAATGTGCGTCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCT 1167071
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| ||||| ||||| || || ||||| ||||| ||||| | || | || || ||
Sbjct 1167070 CTGCTGATCGGGAGGAATACCCTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGT 1167011
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
|| |||| ||| || || | || |||||||| || || || ||||| || || || ||
Sbjct 1167010 GTCTGAAGCCTCGACCTCCAATGTGATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTG 1166951
Query 193358 CAT 193360
|||
Sbjct 1166950 CAT 1166948
Score = 89.7 bits (98), Expect = 9e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || | |||| ||||||||| | ||||| ||| ||||| ||
Sbjct 1166949 ATACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTCTGAATGTTATAATCA 1166890
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | | ||| || | ||||||||||||||| || |||||||| ||||| |||
Sbjct 1166889 GATAATGTGCGACCATCTTCAAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGA 1166830
Query 193251 GGTATTCCTTCT 193262
|| || || |||
Sbjct 1166829 GGAATACCCTCT 1166818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 898872701537520
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