Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq5117 140 6e-28
seq5959 136 8e-27
seq68007 134 3e-26
seq52431 107 4e-18
>seq5117
Length=2329582
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| | ||| | || || || || || | || || |||||||||||
Sbjct 1167634 ATACCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCT 1167575
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || | || || | ||| || ||||||||||| || ||||| ||||| ||
Sbjct 1167574 GAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGA 1167515
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||||||||| || || |||||| ||| ||||| || | ||||| | |||
Sbjct 1167514 GGGATTCCTTCTTTGTCCTGAATTTTAGCTTTAACATTCTCGATCGTGTCTGATGCTTCG 1167455
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| || ||||||||||| | |||||| | ||| ||||||||
Sbjct 1167454 ACTTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGACAAAAATCTGCAT 1167405
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
||||| || | ||| | || || ||||| | ||| | || ||| || || ||||||||
Sbjct 1167862 ATACCGCCACGAAGCCTCAAAACCAAATGCAGAGTGGATTCCTTTTGA-ATGTTATAATC 1167804
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| | ||| || | || || | |||||| ||||||||||| |||||||||||||| ||
Sbjct 1167803 AGACAGTGTGCGACCGTCTTCGAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGG 1167744
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| |||||||| || || || ||||| ||| ||||| || | ||||||| ||
Sbjct 1167743 AGGAATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTC 1167684
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || ||||| || || || || ||||| | ||| ||||||||
Sbjct 1167683 AACTTCCAATGTGATGGTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1167633
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | ||| | || || ||||| || || | ||||| ||||| ||||||
Sbjct 1167406 ATACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCA 1167347
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| ||| | || || | ||||| || |||||||| |||||||||||||| ||
Sbjct 1167346 GACAATGTGCGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGA 1167287
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| ||||| ||||| || || || || | ||||| | ||
Sbjct 1167286 GGAATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCG 1167227
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | || ||||| || || ||||| ||||| | || ||||||||
Sbjct 1167226 ACCTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177
Score = 125 bits (138), Expect = 1e-23
Identities = 167/231 (72%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAG-ATATTATAATC 192365
|||||||| | ||| | || ||||||||||| |||| || || | ||||| |||||
Sbjct 1167178 ATACCACCGCGAAGTCTCAAAACTAAATGTAACGTAGATTCCTTCTTGAATATTGTAATC 1167119
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| ||||| ||| | || || | |||||| || |||||||| |||||||| ||||| ||
Sbjct 1167118 AGACAATGTGCGTCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGG 1167059
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || || ||||| ||||| ||||| || || || || | ||||| | ||
Sbjct 1167058 AGGAATACCCTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTC 1166999
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | || || ||||| ||||| | ||||| | || ||||||||
Sbjct 1166998 GACCTCCAATGTGATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTGCAT 1166948
Score = 114 bits (126), Expect = 3e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| | ||| | || || || || || | || || |||||||||||
Sbjct 1165025 ATACCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCT 1164966
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || | || || | ||| || ||||||||||| ||||| |||||||| ||
Sbjct 1164965 GAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGATCCGGA 1164906
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| || || ||||| ||| || || || | || || | ||||
Sbjct 1164905 GGGATGCCTTCTTTGTCCTGAATTTTCGCTTTGACGTTCTCGATCGTGTCCGAAGCTTCT 1164846
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| || | |||||| || || || || || ||||||| || |||||||||
Sbjct 1164845 ACCTCCAAAGTAATTGTCTTTCCCGTCAAGGTTTTAACGAAGATCTGCATT 1164795
Score = 113 bits (124), Expect = 9e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
|| |||||||| || | ||| | || | |||| ||||| |||||| || || ||
Sbjct 1168087 CCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGGATATTGTAGTCGGAC 1168028
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| |||||| | || || | ||| || ||||| || || | ||| |||||||| || ||
Sbjct 1168027 AAAGTTCGTCCGTCCTCGAGTTGCTTGCCAGCGAAAATCAGTCTTTGTTGATCGGGAGGA 1167968
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| || ||||| ||||| ||||| ||||||||| || | || || | || ||
Sbjct 1167967 ATGCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCTCGATCGTGTCCGAAGCCTCGACC 1167908
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| ||||| | || || | ||||||||||||
Sbjct 1167907 TCCAGTGTGATAGTTTTCCCAGTGAGAGTCTTGACAAATATCTGCAT 1167861
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | ||| | || || ||||| || || | ||||| || |||||||||
Sbjct 1166949 ATACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTCTGAATGTTATAATCA 1166890
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||||||| || |||| || | |||||| || |||||||| |||||||| ||||| ||
Sbjct 1166889 GATAATGTGCGACCATCTTCAAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGA 1166830
Query 192427 GGTATTCCTTCT 192438
|| || || |||
Sbjct 1166829 GGAATACCCTCT 1166818
>seq5959
Length=1871824
Score = 136 bits (150), Expect = 8e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || |||| |||||||| |||| ||| | |||| ||| || ||| || || ||
Sbjct 1420634 ATTCCTCCTCGAAGACGTAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCG 1420693
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | |||| |||| ||| || ||||||||||| | | || ||||| ||
Sbjct 1420694 GAGAGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGA 1420753
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| ||||| || ||| ||| ||||| ||||| ||| || | |||
Sbjct 1420754 GGGATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATAGTATCAGAAGCTTCC 1420813
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| |||||||| ||||| | ||||| | ||| || |||||
Sbjct 1420814 ACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCACAAAGATTTGCAT 1420863
Score = 105 bits (116), Expect = 1e-17
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| || | ||||||||||||||| || | | ||| ||||| || || ||||| ||||
Sbjct 1420479 CATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCTT 1420538
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
| || || ||||| || ||||| ||| | ||||| | ||| ||||| |||||||
Sbjct 1420539 TGTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGAGTAA 1420598
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||||| ||||| | || || | ||| || ||||||
Sbjct 1420599 TGGTTTTGCCAGTAAGAGTCTTCACAAAGATTTGCATT 1420636
>seq68007
Length=840
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||| || | ||| ||||| ||||| || | |||| || || ||| || ||||| ||
Sbjct 468 ACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGA 409
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
| || | | || || | ||||| || || |||||||| | |||||||||||||||
Sbjct 408 AAGAGTCCTACCGTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGCTGTTGATCAGGTGG 349
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
||||||||||||||||||||||| |||||| || ||| | ||| || | ||| ||
Sbjct 348 GATTCCTTCTTTATCTTGTATTTTGGCTTTTACGTTTTCTATGGTATCCGAAGCTTCAAC 289
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||| || ||||| ||||| || || | || || | ||| || ||||||
Sbjct 288 TTCAAGGGTAATTGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGCATT 240
Score = 109 bits (120), Expect = 1e-18
Identities = 139/190 (73%), Gaps = 1/190 (1%)
Strand=Plus/Minus
Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406
|||| || || ||||| || || | |||| |||| |||| |||||| |||||||| |
Sbjct 201 CTTTTGA-ATGTTATAGTCGGAAAGAGTTCTGCCATCCTCCAGTTGTTTGCCAGCAAAAA 143
Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466
| || | |||||||| || || ||||| ||||| || || ||||| || |||||
Sbjct 142 TCAAACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTT 83
Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
||| | ||||| | ||| ||||| || || ||||||||||| || | ||||| | |
Sbjct 82 CTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTTACGA 23
Query 192527 ATATCTGCAT 192536
| ||||||||
Sbjct 22 AGATCTGCAT 13
>seq52431
Length=384
Score = 107 bits (118), Expect = 4e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| || |||| |||||| || || | ||| | || | || ||| || || || || ||
Sbjct 307 ATTCCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGATTCCTTTTGA-ATGTTGTAGTC 249
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | |||| |||| || | ||||||||||||||| || | | ||| ||||| ||
Sbjct 248 GGAAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGG 189
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| ||||| ||||| ||||| ||||| || ||||| ||| | ||||| | |||
Sbjct 188 AGGAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTC 129
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || ||||||||||| || | || || | || ||||||||
Sbjct 128 AACTTCAAGGGTGATGGTTTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 78
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983603212574850
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