Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq68007 179 3e-40
seq52431 167 2e-36
seq5117 143 2e-29
seq5959 136 4e-27
seq1104 129 5e-25
seq4102 125 6e-24
>seq68007
Length=840
Score = 179 bits (198), Expect = 3e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || || |||||||| || || || ||||| ||||| |
Sbjct 13 ATGCAGATCTTCGTAAAAACTCTTACGGGTAAAACCATCACCCTTGAAGTTGAAGCTTCA 72
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| |||||| || || || ||||| |||||||| ||||| || || ||||||
Sbjct 73 GACACAATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCAA 132
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| ||||| || ||||| ||||||||| |||| | || || ||||||
Sbjct 133 CAACGTTTGATTTTTGCTGGCAAACAACTGGAGGATGGCAGAACTCTTTCCGACTATAAC 192
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||||| ||||| || |||| |||| | || |||||
Sbjct 193 ATTCAAAAGGAATCAACACTTCATCTGGTTCTGCGCCTTCGAGGAGG 239
Score = 167 bits (184), Expect = 2e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || || ||||| ||||| ||||| || ||||| ||||| |
Sbjct 241 ATGCAAATTTTTGTGAAGACTCTCACCGGCAAAACAATTACCCTTGAAGTTGAAGCTTCG 300
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || |||||| |||||| || || ||||| ||||||||||| || || ||||||
Sbjct 301 GATACCATAGAAAACGTAAAAGCCAAAATACAAGATAAAGAAGGAATCCCACCTGATCAA 360
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||| ||||| || ||||||||||| || || || | | || ||||| |||
Sbjct 361 CAGCGTTTAATCTTCGCAGGGAAACAGCTAGAAGACGGTAGGACTCTTTCCGATTACAAC 420
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||||||||| ||||| ||||| || || ||| | ||||||||
Sbjct 421 ATCCAAAAGGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 467
>seq52431
Length=384
Score = 167 bits (184), Expect = 2e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || |||||||| || || || ||||| ||||| |
Sbjct 78 ATGCAGATCTTCGTGAAGACTCTCACGGGTAAAACCATCACCCTTGAAGTTGAAGCTTCA 137
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| |||||| || || || |||||||||||||| ||||| ||||| |||||
Sbjct 138 GACACAATAGAAAATGTGAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 197
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||| ||||| || ||||| || |||||| |||| | || || || |||
Sbjct 198 CAGCGTCTGATTTTTGCTGGTAAACAACTTGAGGATGGTAGAACTCTTTCCGACTACAAC 257
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||||| ||||| || |||| ||||| | || |||||
Sbjct 258 ATTCAAAAGGAATCCACACTTCATCTGGTTTTGCGTCTTCGAGGAGG 304
>seq5117
Length=2329582
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || || |||||||| || || || ||||| ||||| |
Sbjct 1167405 ATGCAGATTTTTGTCAAAACACTTACTGGTAAAACGATCACTCTGGAAGTCGAAGCATCA 1167464
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | |||| | ||| || || |||||||||||||| ||||| |||||
Sbjct 1167465 GACACGATCGAGAATGTTAAAGCTAAA-ATTCAGGACAAAGAAGGAATCCCTCCGGATCA 1167523
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| || || || || || || | | | |||||||||||
Sbjct 1167524 GCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGACGGCCGTACTCTCTCAGATTATAA 1167583
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||||||||| | |||||||| | || ||||| || ||
Sbjct 1167584 TATTCAGAAGGAATCGACCTTGCACTTGGTTCTCCGTTTGCGAGGTGG 1167631
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| ||||||| | || || || || ||||| | || |||||||| |
Sbjct 1164796 ATGCAGATCTTCGTTAAAACCTTGACGGGAAAGACAATTACTTTGGAGGTAGAAGCTTCG 1164855
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||| || || ||||||||||| || ||||| |||||
Sbjct 1164856 GACACGATCGAGAACGTCAAAGCGAAA-ATTCAGGACAAAGAAGGCATCCCTCCGGATCA 1164914
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || || || || || || | | | |||||||||||
Sbjct 1164915 ACAAAGATTGATCTTTGCTGGAAAGCAACTTGAAGACGGCCGTACTCTCTCAGATTATAA 1164974
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||||||||| | |||||||| | || ||||| || ||
Sbjct 1164975 TATTCAGAAGGAATCGACCTTGCACTTGGTTCTCCGTTTGCGAGGTGG 1165022
Score = 138 bits (152), Expect = 1e-27
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| |||| || || || || || | || || || || |
Sbjct 1167177 ATGCAGATTTTCGTCAAAACTTTAACAGGAAAGACCATCACATTGGAGGTCGAGGCTTCA 1167236
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || |||| || | ||| || |||||||||||||| || |||||||||||
Sbjct 1167237 GACACAATCGAGAACGTGAAGGCGAAA-ATTCAAGACAAAGAAGGTATTCCTCCCGATCA 1167295
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATA 24881
||| | |||||||||||||| |||||||| || || || ||| |||| ||||| |
Sbjct 1167296 ACAGAGATTGATCTTTGCCGGAAAACAGCTCGAAGA-CGGACGCACATTGTCTGATTACA 1167354
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| |||||||| ||||| ||| | || ||||| ||| || | ||||| ||
Sbjct 1167355 ATATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGACTTCGCGGTGG 1167403
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| |||||||| ||| | || ||| | ||||| || || || || ||||| || || ||
Sbjct 1164565 ACCATGCAGATTTTTGTAAAGACGTTGACCGGAAAGACCATAACCCTCGAGGTCGAGGCT 1164624
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
||||||| | || | ||||| |||||| || ||||| ||||| || || || ||
Sbjct 1164625 TCCGACACTATTGAGAACGTAAAGGCAAAGATTCAGGACAAGGAAGGCATCCCACCTGAC 1164684
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| |||||||||||||| || || || ||||| || || | | | |||| || ||
Sbjct 1164685 CAGCAACGTTTGATCTTCGCTGGAAAGCAGCTTGAAGACGGACGCACCTTGTCTGACTAC 1164744
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || |||||||| || || |||||||| | |||||||||| ||
Sbjct 1164745 AATATCCAGAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGCGGCGG 1164794
Score = 127 bits (140), Expect = 2e-24
Identities = 170/230 (74%), Gaps = 5/230 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || |||||||| || | || || || || |
Sbjct 1166948 ATGCAGATTTTCGTCAAAACTCTCACTGGCAAAACTATCACATTGGAGGTCGAGGCTTCA 1167007
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || |||| || | ||| || ||||||||||| || || |||||||||||
Sbjct 1167008 GACACAATCGAGAACGTGAAGGCGAAA-ATTCAAGACAAAGAGGGTATTCCTCCCGATCA 1167066
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATA 24881
|| | |||||||||||||| ||||| || || || || ||| |||| ||||| |
Sbjct 1167067 GCAGAGATTGATCTTTGCCGGAAAACAACTCGAAGA-CGGACGCACATTGTCTGATTACA 1167125
Query 24882 ACATTCAA-AAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| |||||| |||||||| || |||| || || ||| || | ||||| ||
Sbjct 1167126 ATATTCAAGAAGGAATCTACGTTACATTTAGTTTTGAGACTTCGCGGTGG 1167175
Score = 125 bits (138), Expect = 6e-24
Identities = 159/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| | || || || || || || | ||||| || || |
Sbjct 1167633 ATGCAGATTTTTGTCAAAACTTTGACGGGAAAGACCATCACATTGGAAGTTGAGGCGTCA 1167692
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| || || || ||||| |||||||| ||||| ||||||
Sbjct 1167693 GACACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATTCCTCCAGATCAA 1167752
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881
|| | ||||||||||| || ||||| || || || ||| | || |||| |||||||
Sbjct 1167753 CAGAGATTGATCTTTGCTGGAAAACAACTCGAAGACGGTCG-CACAC-TGTCTGATTATA 1167810
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916
|||||||||||||||| || || || ||||| |||
Sbjct 1167811 ACATTCAAAAGGAATCCACTCTGCATTTGGTTTTG 1167845
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || || || || |||||||| || || || || || || |
Sbjct 1167861 ATGCAGATATTTGTCAAGACTCTCACTGGGAAAACTATCACACTGGAGGTCGAGGCTTCG 1167920
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | |||||| ||| || ||||||||||| || || ||||||||||||
Sbjct 1167921 GACACGATCGAGAATGTAAAAGCAAAAATTCAAGACAAAGAGGGCATTCCTCCCGATCAA 1167980
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||| || || || || || || ||||| ||| |||| || || ||
Sbjct 1167981 CAAAGACTGATTTTCGCTGGCAAGCAACTCGAGGACGGACGAACTTTGTCCGACTACAAT 1168040
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| || || ||||| ||||| |||
Sbjct 1168041 ATCCAGAAAGAATCTACACTTCAC 1168064
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/132 (77%), Gaps = 6/132 (5%)
Strand=Plus/Plus
Query 24802 AGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-- 24859
||| || || ||||||||||| || | |||||||||||||| ||||| || || |||
Sbjct 1166818 AGAGGGTATTCCTCCCGATCAGCAGAGATTGATCTTTGCCGGAAAACAACTTGAAGATGG 1166877
Query 24860 TCGAGAAACA-TGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||| ||| | || |||||||||||||| || ||||| ||| | || ||||| ||| |
Sbjct 1166878 TCG---CACATTATCTGATTATAACATTCAGAAAGAATCCACATTGCATTTGGTTTTGAG 1166934
Query 24919 ATTGCGCGGAGG 24930
| | ||||| ||
Sbjct 1166935 ACTTCGCGGTGG 1166946
>seq5959
Length=1871824
Score = 136 bits (150), Expect = 4e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | ||||| || || || ||||| || || || || || ||||| |
Sbjct 1420863 ATGCAAATCTTTGTGAAAACCCTCACTGGAAAAACCATCACTCTTGAGGTGGAAGCTTCT 1420804
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || |||| | || ||| |||||||||||||||||||| || ||||| |||||
Sbjct 1420803 GATACTATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATCCCTCCAGATCAG 1420744
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| |||||||||| || || || ||||| ||| |||| | || || || |||
Sbjct 1420743 CAACGTCTGATCTTTGCTGGAAAGCAACTGGAAGATGGAAGAACTCTCTCCGACTACAAC 1420684
Query 24884 ATTCAAAAGGAATCGACACTACA 24906
|| || ||||| || ||||| ||
Sbjct 1420683 ATCCAGAAGGAGTCTACACTTCA 1420661
>seq1104
Length=1074228
Score = 129 bits (142), Expect = 5e-25
Identities = 144/191 (75%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || ||||| || ||||| || || ||||| ||| ||
Sbjct 390845 ATGCAGATCTTTGTGAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTAGAGGCCTCC 390904
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || ||||| || || ||||||
Sbjct 390905 GACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGATCAA 390964
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| || || ||||||||||||||| | | | | || ||||| |||
Sbjct 390965 CAGCGGCTCATCTTCGCTGGCAAACAGCTGGAGGATGGGCGCACTCTTTCCGATTACAAC 391024
Query 24884 ATTCA-AAAGG 24893
||||| |||||
Sbjct 391025 ATTCAGAAAGG 391035
>seq4102
Length=4342353
Score = 125 bits (138), Expect = 6e-24
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 139062 GACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCT 139121
|||||| | || ||| || || |||| |||||||| || ||||| | || |
Sbjct 712662 GACAAACATATTAACAGCGATAGACGCTAAATTGCACACAGCAACTTCCCCAGGACCAGA 712603
Query 139122 GTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATT 139181
||||| |||||||| | ||||| ||| || || ||||| || ||||||| ||| |||||
Sbjct 712602 ATATTCAACAATTTCAGTACACAGATTGCTGCATTTGATAGTGCCTAAATGTTGGTGATT 712543
Query 139182 GCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTG 139238
|||||| |||||| |||||||||||||||||| ||||| |||||||| ||||
Sbjct 712542 TGATTTTCGATTACAATGATCTTTGTAAAGCATATAAGGTGTTCCAGTTTCTCCTTG 712486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449506689599080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |