Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4515 114 2e-19 seq715 98.7 2e-14 seq2744 96.9 5e-14 seq2694 87.8 3e-11 seq1722 87.8 3e-11 >seq4515 Length=724337 Score = 114 bits (126), Expect = 2e-19 Identities = 171/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||||||||||||||| || || ||||||||| |||| ||||| || | | Sbjct 56247 TGTATTTGGTGACGGCCTTGGTGCCTTCACTCACGGCGTGCTTGGCAAGTTCTCCAGGAA 56188 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || ||||| ||||| |||| ||| || ||| ||||| Sbjct 56187 GTAGAAGCCTGACAGCAGTCTGAATCTCCCGGGACGTGATAGTCGAGCGTTTGTTGTAAT 56128 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || ||||||| | ||||||| |||| | ||||||||||| ||||| Sbjct 56127 GAGCCAAACGAGATGCCTCGGCGGCGATGCGCTCGAAGACATCGTTGACAAAGCTGTTCA 56068 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| |||| ||||||| || ||| || || || ||||| | || |||| Sbjct 56067 TGATGCTCATCGCTTTGCTGGAGATTCCAGTGTCCGGATGTACTTGCTTCAATACTTTGT 56008 Query 1485710 AAA 1485712 ||| Sbjct 56007 AAA 56005 >seq715 Length=1327288 Score = 98.7 bits (108), Expect = 2e-14 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || ||||| || ||||| || || || ||| |||||| | |||| ||| || ||| Sbjct 1022999 TATTTGGTTACTGCCTTCGTGCCTTCGCTGACCGCGTGCTTCGCCAATTCACCCGGCAAC 1022940 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || | ||||| ||||||||||| || | | |||||| ||||||||| || Sbjct 1022939 AAGAGCCTGACGGCCGTCTGGATCTCCCGAGAGGTGATCGTTGAGCGCTTGTTGTAATGC 1022880 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || || | || || | | |||| | |||| | |||||| || || ||||||| Sbjct 1022879 GCTAGTCTCGATGCTTCAGCGGCGATTCTTTCGAATACGTCGTTCACGAAGCTGTTCATG 1022820 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | |||| ||||||| || ||| |||||||| ||||| || || ||||| Sbjct 1022819 ATGCTCATGGCTTTGCTGGAGATTCCAGTGTCCGGGTGCACTTGCTTCAGTACTTTGTA 1022761 >seq2744 Length=396707 Score = 96.9 bits (106), Expect = 5e-14 Identities = 152/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 794342 CTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCT 794401 ||||||| || ||| | |||||||||||| |||||| ||||||| || || |||| Sbjct 261024 CTTCGTCTCGTGAGATGAGTTCGTTGCTAAAAGTGAGGCCTGGCATGACTCCTCGTTTCT 260965 Query 794402 TGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGC 794461 | ||||||||||| || |||||||| |||||| || |||||||| || || || Sbjct 260964 TCAGCCAAAAGATAGCCGCAAAACTGCCGCTGAAAAAAATACCCTCGACTGCCGCGAATG 260905 Query 794462 CGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACT 794521 ||| | || || | ||| || | | ||| | || ||||| |||| ||||||| Sbjct 260904 CGATTACACGTTCTGGAAATGTAGC---ACTCTCATGATTAATCCAGTTCAATGCCCACT 260848 Query 794522 CTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 || || |||| || | || | ||| ||||| || Sbjct 260847 TGGCTTTCTTCCCTACACACGGAAGCGTCTCGATCGC 260811 >seq2694 Length=6355204 Score = 87.8 bits (96), Expect = 3e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||| || ||| ||| ||||| || ||||| | || || ||||||||||| || || Sbjct 1052467 AGGTGGATCAAGGCACTCTCTTCGAACTGATCTTGGCAGCTAACTACCTCGATATTAAAG 1052408 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 || | ||| | ||||| ||||| || || | ||||| |||||| ||||||| | Sbjct 1052407 GACTTTTGGATGTCACATGCAAAACCGTCGCTAATATGATCAAAGGCAAGACGCCCGAAG 1052348 Query 2035732 ACATCCGCAAGACCTTTAACATCAAG 2035757 | || || ||||| |||||||||||| Sbjct 1052347 AGATTCGTAAGACATTTAACATCAAG 1052322 >seq1722 Length=1169549 Score = 87.8 bits (96), Expect = 3e-11 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||||||||| || || || ||||||||| |||| | |||||| | | Sbjct 453795 TGTATTTGGTGACGGCCTTAGTTCCTTCACTAACGGCGTGCTTGGCTAACTCGCCGGGAA 453736 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || ||||| || || || | || ||| ||||||||| Sbjct 453735 GAAGAAGCCTCACAGCAGTCTGAATTTCCCGAGACGTAATTGTGGAGCGCTTGTTGTAAT 453676 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || || || | ||||||| |||| | ||||| ||||| |||| Sbjct 453675 GAGCCAATCGCGATGCTTCAGCAGCGATGCGCTCGAAGACATCGTTAACAAAGCTATTCA 453616 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| | ||||| || |||||| || |||||||| | |||||| | Sbjct 453615 TGATGCTCATAGCTTTGCTAGAGATTCCAGTGTCGGGATGGACCTGCTTCAACACCTTAT 453556 Query 1485710 A 1485710 | Sbjct 453555 A 453555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7908852197890329