Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq5117 131 1e-25 seq5959 122 6e-23 seq1104 118 7e-22 seq68007 107 1e-18 seq52431 104 2e-17 >seq5117 Length=2329582 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | ||| || || |||| ||||| ||| |||||||| || || ||||| | Sbjct 1164796 TTCCGCCGCGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCAG 1164737 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | | |||| | || || || |||||||| |||||||||| ||||||||||| | | Sbjct 1164736 ACAAGGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGTG 1164677 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || ||| || ||| | || | || ||||||| Sbjct 1164676 GGATGCCTTCCTTGTCCTGAATCTTTGCCTTTACGTTCTCAATAGTGTCGGAAGCCTCGA 1164617 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||||||||||||||| || | ||||||||||| ||||||||| Sbjct 1164616 CCTCGAGGGTTATGGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCATG 1164567 Score = 100 bits (110), Expect = 2e-16 Identities = 146/203 (72%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 34777 AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTT 34836 |||| || | || ||||||||||| || || ||||| | || |||| || || || || Sbjct 1165223 AATGTTGAT-TCTTTCTGAATGTTGTAATCAGATAGAGTTCGGCCATCTTCGAGCTGTTT 1165165 Query 34837 TCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTG 34896 |||||||||||||| | ||||| ||| | || | || ||||| || | ||||| Sbjct 1165164 TCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATCCTGAATTTTGGC 1165105 Query 34897 TTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTG 34954 |||||| || || |||| || ||||| || || | || |||||||||||||| Sbjct 1165104 TTTGAC--ATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTTCCCGTC 1165047 Query 34955 AGGGTCTTTACAAAGATCTGCAT 34977 | || || ||||| |||||||| Sbjct 1165046 AAAGTTTTGACAAAAATCTGCAT 1165024 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| ||||||||||| || || || |||| | || || ||||| ||||| || ||| Sbjct 1167823 TCCTTTTGAATGTTATAATCAGACAGTGTGCGACCGTCTTCGAGTTGTTTTCCAGCAAAG 1167764 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || || || ||| | || | || |||||||| | ||||| |||||| || Sbjct 1167763 ATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGAATTTTGGCTTTGAC--AT 1167706 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || |||| || ||||| || || | || |||||||||||||| | || || | Sbjct 1167705 TCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTTCCCGTCAAAGTTTTGA 1167646 Query 34965 CAAAGATCTGCAT 34977 |||| |||||||| Sbjct 1167645 CAAAAATCTGCAT 1167633 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||||| ||||| || || || | || | || Sbjct 1165007 AGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCTGAGAGAGTACGGCCGTCT 1164948 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| || ||||||| || ||| || || | || | || || ||||| Sbjct 1164947 TCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGATCCGGAGGGATGCCTTCTTTGTCC 1164888 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||||||| | |||| || || || || || | || || ||| Sbjct 1164887 TGAATTTTCGCTTTGACGTTCTCGATCGTGTCCGAAGCTTCTACCTCCAAAGTAATTGTC 1164828 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| | ||| || || ||||||||||| Sbjct 1164827 TTTCCCGTCAAGGTTTTAACGAAGATCTGCAT 1164796 >seq5959 Length=1871824 Score = 122 bits (134), Expect = 6e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || || | | |||| |||||||||||||| || || Sbjct 1420672 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAA 1420731 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| |||||||| ||| | || | || || ||||| | || || |||||| Sbjct 1420732 GATCAGACGTTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTAGCTTTGACATT 1420791 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 |||| | ||| || || || |||| || ||||| ||||| |||||||| || || Sbjct 1420792 CTCTATAGTATCAGAAGCTTCCACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCAC 1420851 Query 34966 AAAGATCTGCATGAT 34980 |||||| |||||||| Sbjct 1420852 AAAGATTTGCATGAT 1420866 >seq1104 Length=1074228 Score = 118 bits (130), Expect = 7e-22 Identities = 143/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||||||||| || || || || ||||| |||| ||||| || || || |||||||| Sbjct 391032 TTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAGATG 390973 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 || || || || ||| | || | ||||||||||| | || || || || || || Sbjct 390972 AGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAAC--ATTCT 390915 Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 || | || |||||| || |||| ||| |||||||| ||||||||||| || |||| Sbjct 390914 CGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACAA 390855 Query 34968 AGATCTGCATGAT 34980 |||||||||| || Sbjct 390854 AGATCTGCATAAT 390842 >seq68007 Length=840 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 ||||||| | | | ||| ||||| |||| || || | ||||| |||||||||||||| Sbjct 241 TTCCTCCTCGAAGGCGCAGAACCAGATGAAGTGTTGAT-TCCTTTTGAATGTTATAGTCG 183 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || || | | |||| |||||||| || || || || |||| ||||| || ||| | Sbjct 182 GAAAGAGTTCTGCCATCCTCCAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGG 123 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | ||||| ||||| | ||||| || || | |||| | || || || Sbjct 122 GGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCA 63 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||| ||| ||||| || ||||| || || ||||| |||||||||||| Sbjct 62 ACTTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTTACGAAGATCTGCATG 12 >seq52431 Length=384 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 ||||| |||| ||| ||||| |||||||| ||||| || || | | |||| || Sbjct 286 ACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCA 227 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 ||||| || || || || ||||| || ||||| ||| | || | ||||| ||||| | Sbjct 226 AGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGG 167 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| || || | |||| | || || || || |||| ||| ||||| || Sbjct 166 ATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGTTTTA 107 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| ||||| || |||||||||||| Sbjct 106 CCCGTGAGAGTCTTCACGAAGATCTGCATG 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325416884357309