Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq10522 232 5e-55 seq6737 197 1e-44 seq3291 114 1e-19 seq413 114 1e-19 >seq10522 Length=301676 Score = 232 bits (256), Expect = 5e-55 Identities = 725/1107 (65%), Gaps = 22/1107 (2%) Strand=Plus/Plus Query 281442 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 281501 |||||||||| || | ||||| |||||||| ||||| || |||||||| | || || | Sbjct 198192 TACCATTGGCGTCGATGTCAAAGGTGACTTCGATTTGCGGTACCCCTCTAGGCGCCGGAG 198251 Query 281502 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 281561 | || || || | |||| | || || |||| || || ||||| | || |||| Sbjct 198252 GTATACCCGTCAGCTCAAATTTGCCGAGGATATTGTTGTCCTTAGTCATCGCTCTCTCAC 198311 Query 281562 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 281621 ||||| ||| ||||||| ||| | | |||||| || ||||| || ||||| |||| Sbjct 198312 CCTCGTAAACTTGGATAAGTACTCCCGGTTGATTGTCGGAATATGTAGTAAACG-TCTGA 198370 Query 281622 ATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | | || | || || || ||||| || | || | ||||||||| || ||||| Sbjct 198371 GTCTGTTTCGTTGGGATCGTCGTGTTCCTCTTGATCAAGGTGGTCATAACGCCGCCAGCG 198430 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 || || | ||| | || | ||||| ||||| | |||| | || ||||| | Sbjct 198431 GTCTCGATACCCAACGACAACGGAGTCACATCCAGCAGGAGCAAATCTTGAACCG---CC 198487 Query 281741 TCAG-TTTG--ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 |||| |||| ||| ||||| || || |||| || || || || |||||||| ||| Sbjct 198488 TCAGATTTGTCACCGTGCAGAATCGCCGCCTGAACTGCCGCGCCGTAGGCAACAGCCTCA 198547 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCT 281856 || ||||| | || || || | || || || ||||| || | ||||| || || | Sbjct 198548 TCTGGATTGATAGATTTGTTCAATTCCTTGCCGTTGAAGAAGTCTTGAAGTAACTTCTGA 198607 Query 281857 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 | ||| || || | | || || ||||| | ||||| || || || | || || Sbjct 198608 -ATCTTTGGTATCCTGGTGGAGCCACCAACCAGAACAATGCTGTGAACTTGAGCCTTGTC 198666 Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGA 281976 || |||| || | | || ||||||||||| ||| ||| || ||||| | Sbjct 198667 CATCTTTGCGTCTCTAAGTGCCTTCTCAACGGGTTCGAGAGTGCTTCTGAATAAGTCGGC 198726 Query 281977 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 282034 || ||||| ||||| | || ||||| || || | || || || || || || ||| Sbjct 198727 GCAGAGTTCCTCGAACCTGGCCCTAGT--GATCGATGTGTAGAAGTCGATACCCTCAAAC 198784 Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 282094 || || |||| || || | | || ||||| || | | | || || | || Sbjct 198785 AACGAGTCAATCTCGATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCG 198844 Query 282095 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCAAATCTGTTTTATATT 282152 || || ||||| | | | | ||| | || ||| | ||| |||| |||| || | Sbjct 198845 CAGGCGGTCCTCAAGCGCCTCACAGCTCT--CTTGTTGCTGCTCAGATCTTTTTTGTACT 198902 Query 282153 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 282212 | ||||| || |||| || | |||| | ||||| ||||| || || || || | Sbjct 198903 TCCTCTTAAACTCTTGCACGAAGTGGTTTACCATTCGATTGTCAAAGTCCTCGCCACCGA 198962 Query 282213 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 282272 | || | || | ||| | | |||||| ||| | || || |||| | || | | Sbjct 198963 GATGCGTGTCGCCGGCCGTGGATTTTACTTCGAAGATACCGTCCTCAATTGTCAGGATCG 199022 Query 282273 TAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG- 282331 |||||| ||| ||||| |||| || || || || |||||| |||| | || Sbjct 199023 ACACATCAAAGGTACCACCGCCCAAGTCGAAGATCAGGACATTC--TTCTCACCCGCGGC 199080 Query 282332 -TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 || ||||||||||| ||||| | ||||| || || || || || || || || | || Sbjct 199081 CTTCTTATCAAGACCGTACGCTATTGCAGCGGCCGTAGGCTCGTTTATTATCCTAAGGAC 199140 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 ||| || ||||||||| || ||||| || || || || || || || || || ||||| Sbjct 199141 ATTCAGGCCAGCAATTGCGCCGGCATCCTTCGTCGCCTGCCTCTGAGAGTCATTGAAATA 199200 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTG 282510 || || || || || || |||| ||||| || || | ||||| |||||| | Sbjct 199201 AGCCGGCACGGTGATGACAGCATTTGTTATAGTCTTGCCTAGGTAAGCTTCTGCTGTCTC 199260 Query 282511 TTTCATTTTACTTAAAATCATTGATGA 282537 |||||||| |||| | ||| || || Sbjct 199261 CTTCATTTTCGTTAAGACCATGGAGGA 199287 >seq6737 Length=3265217 Score = 197 bits (218), Expect = 1e-44 Identities = 740/1148 (64%), Gaps = 18/1148 (2%) Strand=Plus/Plus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || ||||| ||||| || || |||| ||||||||||| |||||| || || ||| Sbjct 98283 TTGGTAATGGTAATCTTGTTCTCTTTGCCAGTTGATTTATCCACGGCAGAGACGTTTAGA 98342 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| || || || | ||||| || ||||| || ||||| || || | | || || Sbjct 98343 ATACCGTTTGCGTCGATGTCAAACGTAACTTCGATCTGAGGAACTCCGCGGGGTGCTGGG 98402 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | ||| |||| || ||||||||| ||||| | || ||| Sbjct 98403 GGGATACCGCTAAGCTCGAATTTTCCTAGTAGATTATTATCCTTAGTCATGGCGCGCTCA 98462 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||| | | || || || ||| ||||| || | ||| ||||| || |||| Sbjct 98463 CCCTCGTACACCTGAATCAACACGCCAGGCTGATTGTCGGCATAGGTTGTGAAGG-TCTG 98521 Query 281621 GATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 | | | | || || || ||||| || | |||| |||||| | ||| || || Sbjct 98522 AGTCTGCTTCGTCGGGATAGTAGTGTTCCTCTTGATAAGCGCGGTCATGACACCGCCGGC 98581 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 281739 ||| || | ||| ||||| || || ||||| |||| || | | | || | || | Sbjct 98582 TGTCTCGATACCCAGAGAGAGCGGCGTGACGTCAAGCAGAAGCAAGTCCTGCACTT---C 98638 Query 281740 ATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 || | || | || | || |||||||| || | |||||||||||||| ||||| || Sbjct 98639 CTCGGATTTATCACCGTGCAGGATAGCTGCCTGTACGGCAGCACCATATGCCACAGCCTC 98698 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTC 281855 |||||||| | | || || || | || |||||||| || | || | || || | Sbjct 98699 GTCAGGATTGATGGATTTGTTGAGCTCCTTGCCATTGAAGAAGTCCTGCAGGAGCTTCT- 98757 Query 281856 TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 | ||| ||||| || | || || ||||| || || || || || | || | || | Sbjct 98758 GAATCTTGGGAATTCGCGTAGAACCACCAACCAAGACGATATCGTGAATTTGAGCCTTGT 98817 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 ||| || | || | || || |||||||| ||| | | | || | || | Sbjct 98818 CCATCTTGGCGTCGCGCAGCGACTTCTCGACGGGTTCGAGAGTACCACGGAAGAGATCGG 98877 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 282035 || ||||| ||||| ||||| ||||| | | || | || ||||| ||| ||| Sbjct 98878 CGCAGAGTTCCTCGAAACGAGCTCGAGTAATGGAGGTATAGAAGTCGATTCCCTCGTACA 98937 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095 | ||||| | || || | | || || ||||| || || | |||||| || || |||| Sbjct 98938 ATGAATCGATCTCGATACTGGCCTGCGTAGAAGACGACAGAGTACGTTTCGCGCGCTCAC 98997 Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGAT-TCAAATCTGTTTTATATTT 282153 | || || | || | || | ||| || || ||||| |||| || | || || || Sbjct 98998 AGGCCGTGCGCAGACGGCGAAGGGC--GCGCTTGTTTGATGTCAAGTCCTTCTTGTACTT 99055 Query 282154 TCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAA 282213 | |||||| || | ||| | | || | || || |||||||||||||| |||| Sbjct 99056 GCGCTTGAACTCCTGTACAAAGTGGTTGACCATGCGGTTGTCAAAATCTTCACCACCCAG 99115 Query 282214 TTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGT 282273 | ||| | || | || | | | || | ||| | |||||||| | | | | | Sbjct 99116 ATGAGTGTCACCCGCTGTGGATTTGACCTCGAAGATGCCATCTTCGATGGTTAGGATGGA 99175 Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG-- 282331 || || || |||||||| | |||||| || || || || | || ||| Sbjct 99176 CACGTCGAAAGTGCCACCACCGAGATCAAAGATCAGGACGTT--TCGCTCGCCGGTGGCC 99233 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || ||||||||||||| || || || || || || |||||||| | || || Sbjct 99234 TTCTTGTCGAGACCATACGCAATCGCGGCGGCGGTGGGCTCGTTAATAATACGTAATACG 99293 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || | || | || | || || || || || || || | || || ||||| || || Sbjct 99294 TTCAAGCCCGAGATGGTACCAGCGTCCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGTAA 99353 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 || || || || || || |||| || || ||| || | ||| || ||| || | Sbjct 99354 GCGGGGACGGTGATCACAGCATTGGTGACAGTTTTGCCTAGATACGCCTCTGCGGTCTCC 99413 Query 282512 TTCATTTT 282519 |||||||| Sbjct 99414 TTCATTTT 99421 >seq3291 Length=4610 Score = 114 bits (126), Expect = 1e-19 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 637123 ATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCA 637182 ||||| |||| |||| ||| |||||||| || ||||||||| | ||||| || ||||| Sbjct 1998 ATTGTGGATTTTTCTAGTCCTAATATTGCCAAGGAAATGCATGTGGGACACTTGAGATCC 1939 Query 637183 ACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGT 637242 || || ||||| || ||||| ||| | |||||| | ||||| ||||| | | Sbjct 1938 ACGATAATTGGAGATAGTATTTCAAGGCTGTTAGAATACTTAGGACATGATGTATTAAGA 1879 Query 637243 ATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATTAAAAAT 637302 | |||||||| ||||| ||||| || || || ||||||||||| || || || || || Sbjct 1878 CTCAATCATGTAGGTGACTGGGGTACACAGTTTGGTATGTTAATAGCGCATCTTCAAGAT 1819 Query 637303 A 637303 | Sbjct 1818 A 1818 >seq413 Length=1946445 Score = 114 bits (126), Expect = 1e-19 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 ||| |||| | |||||| | ||||| |||| ||||| || ||||| || ||||| | Sbjct 1145061 TTTATCTTCTTGTTTATCCATGCCATATGCAAGTGCAGCTGCGGTTGGCTCGTTAATTAC 1145002 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | | ||||| | ||||| ||| || ||||| || || ||||||| ||||||||| Sbjct 1145001 ACGAAGGACATTTAATCCAGCGATTTGCCCAGCATCCTTTGTTGCTTGTCGTTGTGAATC 1144942 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTCCAATATAAGCGC 282500 |||||||| || || ||||||||||| |||| | |||| | | | || |||||| Sbjct 1144941 ATTAAAATACGCTGGCACAGTAATAACAGCATTTTTTACAGACGTGTTTAA-ATAAGCTG 1144883 Query 282501 TTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555 ||| |||| |||||||| | || | | || | |||||| ||||||||| Sbjct 1144882 CTGCGGTTTCCTTCATTTTCCCTAGTACAAATGCTCCAATTTGGCTTGGAGAATA 1144828 Score = 98.7 bits (108), Expect = 7e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 || |||||||| || ||||| ||||| || ||||||| ||| |||| ||| || || Sbjct 1145039 CCATATGCAAGTGCAGCTGCGGTTGGCTCGTTAATTACACGAAGGACATTTAATCCAGCG 1144980 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 |||| ||| ||| |||||||||| |||| ||||||||||| ||||| |||||| Sbjct 1144979 ATTTGCCCAGCATCCTTTGTTGCTTGTCGTTGTGAATCATTAAAATACGCTGGCACAGTA 1144920 Query 86239 ATAACTGCTTTATTAATAGGTTTTTGTAAATA 86270 ||||| || || || | || | | |||||| Sbjct 1144919 ATAACAGCATTTTTTACAGACGTGTTTAAATA 1144888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3737217703653486