Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq6725 86.0 7e-12 >seq6725 Length=187087 Score = 86.0 bits (94), Expect = 7e-12 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 146378 AAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGCAA 146437 || || |||||||| || | || || ||||| | | ||| | ||||| ||| Sbjct 175438 AAAGTTGCGCAATTGGCAGGATCGGTCGCTGAGCATTCGGCTTATCATCACGGCGAGACG 175379 Query 146438 AACTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCC 146497 |||| | |||||| ||||| ||||||| |||| |||||||||||||||||| Sbjct 175378 TCCTTGATGGCGACCATAATTAATCTCGCGCAAAATTTCGTGGGCAGCAATAATATCAAT 175319 Query 146498 CTTCT-CTACCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGT 146556 | || | ||| || |||||||| ||||| | | || || ||||| || || ||| Sbjct 175318 TTGCTGCAACCCATCGGTCAATTCGGTACAAGACTTGCTGGCGGAAAGGATGCCGCCAGT 175259 Query 146557 CCCAGATATATTTTCAC 146573 || ||||| |||||||| Sbjct 175258 CCGAGATACATTTTCAC 175242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521092435547480