Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq5117 86.0 1e-11 >seq5117 Length=2329582 Score = 86.0 bits (94), Expect = 1e-11 Identities = 104/144 (72%), Gaps = 11/144 (8%) Strand=Plus/Minus Query 81637 CAAACACAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTC------ 81690 |||| |||||| ||||||| || || ||||||||||| || || | || ||| Sbjct 1167839 CAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGACCGTCTTCGAG 1167780 Query 81691 -----TTCTAACAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAAT 81745 ||| | ||||||| | ||| |||||| ||||| | ||| ||||||| || ||||| Sbjct 1167779 TTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGAAT 1167720 Query 81746 CTTTGCTTTTATATTTTCAATCGT 81769 || ||||| | ||| || ||||| Sbjct 1167719 TTTGGCTTTGACATTCTCGATCGT 1167696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902626237300960