Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq5117 109 5e-19
seq68007 82.4 7e-11
seq4102 82.4 7e-11
>seq5117
Length=2329582
Score = 109 bits (120), Expect = 5e-19
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || ||||| ||||| ||||| | ||||| | || ||||| ||
Sbjct 1167177 ATGCAGATTTTCGTCAAAACTTTAACAGGAAAGACCATCACATTGGAGGTCGAGGCTTCA 1167236
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || |||||| | || || |||||| || ||||| ||||| || ||||||||
Sbjct 1167237 GACACAATCGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCTCCCGATCAA 1167296
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | || | | ||| ||||| |||||||| | | | |||| | ||||||
Sbjct 1167297 CAGAGATTGATCTTTGCCGGAAAACAGCTCGAAGACGGACGCACATTGTCTG--ATTACA 1167354
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
||||||||||||||||||| | ||||| || || |||
Sbjct 1167355 ATATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGA 1167392
Score = 102 bits (112), Expect = 7e-17
Identities = 156/219 (71%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || ||||| | || || ||| | ||||| | || ||||| ||
Sbjct 1166948 ATGCAGATTTTCGTCAAAACTCTCACTGGCAAAACTATCACATTGGAGGTCGAGGCTTCA 1167007
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || |||||| | || || |||||| || ||||||||||| || |||||||||
Sbjct 1167008 GACACAATCGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCTCCCGATCAG 1167067
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352
|| ||| | || | | ||| |||||||||||||| | | | |||| |||||||
Sbjct 1167068 CAGAGATTGATCTTTGCCGGAAAACAACTCGAAGACGGACGCACATTGTC--TGATTACA 1167125
Query 25353 ATATTCAA-AAAGAATCCACCATTCATTTAGTGTTAAGA 25390
|||||||| || ||||| || | |||||||| || |||
Sbjct 1167126 ATATTCAAGAAGGAATCTACGTTACATTTAGTTTTGAGA 1167164
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| |||||| | || || ||| ||||||| | |||||||||||
Sbjct 1167405 ATGCAGATTTTTGTCAAAACACTTACTGGTAAAACGATCACTCTGGAAGTCGAAGCATCA 1167464
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || |||||| | || ||| |||||| || ||||| || || || || ||||||
Sbjct 1167465 GACACGATCGAGAATGTTAAAGCTAAAATTCAGGACAAAGAAGGAATCCCTCCGGATCAG 1167524
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| || | || | | || || ||||| ||||| | | | | || ||||| |||
Sbjct 1167525 CAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGACGGCCGTACTCTCTCAGATTATAAT 1167584
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| || ||||| ||| | || || || | | ||| |||| ||
Sbjct 1167585 ATTCAGAAGGAATCGACCTTGCACTTGGTTCTCCGTTTGCGAGGTGG 1167631
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| ||||| || || ||||| | ||||| | ||||| || ||
Sbjct 1167633 ATGCAGATTTTTGTCAAAACTTTGACGGGAAAGACCATCACATTGGAAGTTGAGGCGTCA 1167692
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || |||||| | || ||| |||||| || || || || || || || |||||
Sbjct 1167693 GACACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATTCCTCCAGATCAA 1167752
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352
|| ||| | || | | || |||||||||||||| | | | | |||| ||||| |
Sbjct 1167753 CAGAGATTGATCTTTGCTGGAAAACAACTCGAAGACGGTCGCACACTGTC--TGATTATA 1167810
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAG 25389
| |||||||| |||||||| | ||||| || || ||
Sbjct 1167811 ACATTCAAAAGGAATCCACTCTGCATTTGGTTTTGAG 1167847
>seq68007
Length=840
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | || |||||||| | || || ||| | ||||| | ||||| |||||
Sbjct 12 CATGCAGATCTTCGTAAAAACTCTTACGGGTAAAACCATCACCCTTGAAGTTGAAGCTTC 71
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | || || ||||| || |||||||| || || || |||||
Sbjct 72 AGACACAATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCA 131
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| | | |||| | ||||||||||| || |||| |||| | | ||| || ||
Sbjct 132 ACAACGTTTGATTTTTGCTGGCAAACAACTGGAGGATGGCAGAACTCTTTCCGACTATAA 191
Query 25354 TATTCAAAAAGAATCCACCATTCAT 25378
|||||||| ||||| || |||||
Sbjct 192 CATTCAAAAGGAATCAACACTTCAT 216
>seq4102
Length=4342353
Score = 82.4 bits (90), Expect = 7e-11
Identities = 217/326 (67%), Gaps = 4/326 (1%)
Strand=Plus/Minus
Query 137390 TACCGATAGGTCTGTGTTTAAAATTTGATATTTGAG-CGCTAACAAGCGGATAAAAGTTT 137448
|||| |||||||||||||| ||| ||| || | | || | |||||||| ||
Sbjct 712807 TACCAATAGGTCTGTGTTTTTGATTAGATGCTTTCGTCTCTGGGATA-GGATAAAAATTA 712749
Query 137449 GCGTCTATAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCG 137508
|||| || | | ||| ||||| |||||||| | | | |||| | | || |||
Sbjct 712748 ACGTCGATGACTTTATCTAGATTACGAGTAACGATTTTTGCCACTGTTTTAAGTTTATCG 712689
Query 137509 AAATCGAAGCTTTTAGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTG 137568
|||||||| |||| | | | | || |||| |||| || || ||||| ||||| |||
Sbjct 712688 AAATCGAAAGTTTTGGTGTCTGTATTGACAAACATATTAACAGCGATAGACGCTAAATTG 712629
Query 137569 CATACGGCCGTTTCTGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTT 137628
|| || || ||| | | |||| |||||||| | || ||||||||| |
Sbjct 712628 CACACAGCAACTTCCCCAGGACCAGAATATTCAACAATTTCAGTACACAGATTGCTGCAT 712569
Query 137629 CGGATCACTCCCAAATTCTTTTGATTGTTTTTCTCGTTGAC-GTGATCTTTATATATCAT 137687
||| || |||| | ||||| | || ||| | || |||||||| || | |||
Sbjct 712568 TTGATAGTGCCTAAATGTTGGTGATT-TGATTTTCGATTACAATGATCTTTGTAAAGCAT 712510
Query 137688 ATACGGAGTTCCGGTTTCGACTTGAG 137713
||| || ||||| ||||| ||||||
Sbjct 712509 ATAAGGTGTTCCAGTTTCTCCTTGAG 712484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444707663039520
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