Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2744 95.1 2e-13 >seq2744 Length=396707 Score = 95.1 bits (104), Expect = 2e-13 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155 || ||||| ||| | |||| || |||| || ||| | ||||| |||| ||||| || Sbjct 260811 GCGATCGAGACGCTTCCGTGTGTAGGGAAGAAAGCCAAGTGGGCATTGAACTGGATTAAT 260870 Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCT 1456214 | ||| | | ||| ||| | || || | ||| || || || |||||||| || | Sbjct 260871 CATGAGAGTG-CTACA-TTTCCAGAACGTGTAATCGCATTCGCGGCAGTCGAGGGTATTT 260928 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCC-ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273 ||||| |||||||| |||| | ||||||||||| ||||| || || ||||||| || Sbjct 260929 TTTTCAGCGGCAGTTT-TGCGGCTATCTTTTGGCTGAAGAAACGAGGAGTCATGCCAGG- 260986 Query 1456274 CTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGT 1456312 | || |||||||||||| | ||| || |||||||| Sbjct 260987 CCTCACTTTTAGCAACGAACTCATCTCACGAGACGAAGT 261025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7171106736288782