Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4102 104 3e-17
seq2744 102 1e-16
seq5686 93.3 6e-14
>seq4102
Length=4342353
Score = 104 bits (114), Expect = 3e-17
Identities = 188/275 (68%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 69962 GAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGT 70021
|||| | |||||||| || |||| |||| | || || |||| || || || || |
Sbjct 711680 GAAATTACCTAGACATCTGCTGATTGTTAGTACAAGCGTTGAATAGCGTTGGTGAAGCAT 711621
Query 70022 GAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACT 70081
| || || || |||||| | |||||| ||||| ||| || || || || |
Sbjct 711620 GTGTAAAATATCGTTCAGACAAATAATTGTACGTTTCTATAACTTTGTCAATGTCGTTTT 711561
Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141
||||| || | || || | |||||||||||| ||||| | || || | || ||
Sbjct 711560 CGTGAATACCAACAGCTACTCTCATCAACATATGTTGAGGCCTCTCAACTATCTTGCCAT 711501
Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGT 70201
| ||||||| ||| || | |||| || ||||| || |||| ||| || || ||| |
Sbjct 711500 TGATTTTCAGCAGATAGCTTCTTTCGAGCGTTTTGAAACCAATATAATTATAACTAAAAT 711441
Query 70202 CTCTTTCGTAAATAATAACAGAATTTAGTTTATCC 70236
||| ||||| || ||| |||||| |||| |||||
Sbjct 711440 CTCGATCGTATATTATAGCAGAATCTAGTCTATCC 711406
Score = 102 bits (112), Expect = 1e-16
Identities = 226/335 (67%), Gaps = 8/335 (2%)
Strand=Plus/Minus
Query 69116 TACCGATAGGTCTATGTCTCTTATTTGAA-CTTTCAGCTTCTGGAATAGGATAATAATTA 69174
|||| |||||||| ||| | | ||| || ||||| || |||| ||||||||| |||||
Sbjct 712807 TACCAATAGGTCTGTGTTTTTGATTAGATGCTTTCGTCT-CTGGGATAGGATAAAAATTA 712749
Query 69175 ATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGA 69234
| || || | ||||| ||||| || || | ||| |||| || |||||
Sbjct 712748 ACGTCGATGACTTTATCTAGATTACGAGTAACGATTTTTGCCACTGTTTTAAGTTTATCG 712689
Query 69235 AAATCAAA-----TCGTCCATCTATA-ACAAACATATTCAGTGCTACAGATGCTAGATTA 69288
||||| || | || | ||| ||||||||||| | || | ||| |||| |||
Sbjct 712688 AAATCGAAAGTTTTGGTGTCTGTATTGACAAACATATTAACAGCGATAGACGCTAAATTG 712629
Query 69289 CAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACAT 69348
|| || || || || || | | ||||| | || || ||||| ||||| || |||
Sbjct 712628 CACACAGCAACTTCCCCAGGACCAGAATATTCAACAATTTCAGTACACAGATTGCTGCAT 712569
Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408
|||||||| || | || ||| ||||| ||| ||||| || |||||||| |||
Sbjct 712568 TTGATAGTGCCTAAATGTTGGTGATTTGATTTTCGATTACAATGATCTTTGTAAAGCATA 712509
Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443
| || || |||||||| |||||| || |||
Sbjct 712508 TAAGGTGTTCCAGTTTCTCCTTGAGATCTGAGAAT 712474
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 68698 AGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTA 68757
|| ||||||||||| || || ||| || ||||| || || | | ||| |||||
Sbjct 713379 AGTAGATGCGGATTGACGATGACAAACTCTCCAGACAATACGCGCCTCACGTAGATATTG 713320
Query 68758 CTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGC 68817
|| || || ||||| | |||||| ||||| || | ||| || || || || || ||||||
Sbjct 713319 CTCGTGTACGGTTCAATAGATTCGTTATTCCCTAAAATCTGCGCTGTCGAGGCCGTTGGC 713260
Query 68818 ATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGT 68877
|||||||| | || | |||||| | || || ||| || |||| | |
Sbjct 713259 ATAGGTGCTATTAAAAGTGAATTTCTCACTCCGTGCTCCGCGATCTTCGCTTTCAATTCA 713200
Query 68878 TTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930
| ||||| ||| | ||| | |||| ||| ||||| | ||||||||| || ||
Sbjct 713199 TCCCAATTCCATAAATCCGTTGGTTTAACGTTCCACATATCGTATTGGAGGAT 713147
Score = 86.0 bits (94), Expect = 9e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729
||| | ||||| || | ||| || | |||||||| |||||||||||||| ||| || ||
Sbjct 712089 TTTCTCTTAAGTTCCAAAAATTCGAAAATATCAGCATGCCATGGTTCTAAATAAATAGCA 712030
Query 69730 ATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761
| |||| |||||||| ||||||||||||||
Sbjct 712029 AATGCTCCTGGTCGTTTGTTTCCTCCCTGATC 711998
>seq2744
Length=396707
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 39908 TACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 39967
|||||||| |||||||| || || || || || || || ||||| ||||| | ||||||
Sbjct 260636 TACATTTCAGAATGGATATTCTCTATGGCAATTTGGAAGCCGTAGAAACAACGTGCTTCG 260577
Query 39968 GTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTA 40027
| |||| || || || || || || || ||| ||||| || || ||||| |
Sbjct 260576 GCGATTTTCACTTCCTGACTGAACCTCTCAATCAGATTCTCATTGACGATACCATCGGAA 260517
Query 40028 GCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGG 40073
||||| || |||||||| ||||| ||||||||||| |||||||
Sbjct 260516 GCGGCGAAGAATGCCAAGACATGAGAGATAAAATATTTCTCATCGG 260471
>seq5686
Length=2262380
Score = 93.3 bits (102), Expect = 6e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393
||||||| | || |||||||||||||| | || |||||||| ||||| ||||||| |
Sbjct 1101220 CACTAAAGACCTTCTTTGTTTCCTTGTGCAGGTTGGATATGGCAATTCTAGCTGCTAAAG 1101279
Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453
| ||||| || |||||||| | | ||| || || |||| || || || |||| |
Sbjct 1101280 TTGCATAATCTGGATGTTGATTGATCATAGTCGCCGCAGTTTCAGCTGCCAAGTTATCCA 1101339
Query 70454 ATTCTATAGTTGTAACTCC 70472
|||| || ||||| |||||
Sbjct 1101340 ATTCGATCGTTGTCACTCC 1101358
Score = 89.7 bits (98), Expect = 7e-13
Identities = 93/121 (77%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 69506 TATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGAC 69565
|||| ||| ||| |||||||| |||||| | ||| |||||||| || |||| ||| |
Sbjct 1100151 TATAAAGC--TTCAAATTCATCACCCCAAGCTTCAATTAATCCAGGGCACTCATGTGGGC 1100208
Query 69566 ACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAA 69625
|||| | ||| ||||||||||| | ||| |||||||| |||| ||| ||| |||| |
Sbjct 1100209 ACATTAGGTTCCATACATCATCATCATAAACACGTTTCATGAATAAATCTGGAGTCCACA 1100268
Query 69626 G 69626
|
Sbjct 1100269 G 1100269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686311953530040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |