Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2744 104 2e-17 >seq2744 Length=396707 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888 || ||| ||||||| ||| || ||||| || || || || ||| || || |||||| Sbjct 260476 GAGAAATATTTTATCTCTCATGTCTTGGCATTCTTCGCCGCTTCCGATGGTATCGTCAAT 260535 Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948 || ||| || || |||| || ||||| || | | |||||||| ||||| || Sbjct 260536 GAGAATCTGATTGAGAGGTTCAGTCAGGAAGTGAAAATCGCCGAAGCACGTTGTTTCTAC 260595 Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACG 44008 || || |||||||||||||| ||||| ||||| ||||||||| | | || || || || Sbjct 260596 GGCTTCCAAATTGCCATAGAGAATATCCATTCTGAAATGTACTCTTTGCTCATTGAAACT 260655 Query 44009 TACAT 44013 ||||| Sbjct 260656 TACAT 260660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397119289063555