Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq6725 84.2 2e-11
>seq6725
Length=187087
Score = 84.2 bits (92), Expect = 2e-11
Identities = 185/274 (68%), Gaps = 4/274 (1%)
Strand=Plus/Plus
Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087
|||||| ||||||| | ||||| |||||||| || || || || | || || || ||
Sbjct 175241 CGTGAAAATGTATCTCGGACTGGCGGCATCCTTTCCGCCAGCAAGTCTTGTACCGAATTG 175300
Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147
|| ||| | || | |||| || ||| |||||||||||| || || | ||| |
Sbjct 175301 ACCGATGGGTTGCAGCAAATTGATATTATTGCTGCCCACGAAATTTTGCGCGAGATTAAT 175360
Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207
|| || || || || || ||||| ||||| |||| ||||| |||| ||||
Sbjct 175361 TATGGTCGCCATCAAGGACGTCTCGCCGTGATGATAAGCCGAATGCTCAGCGACCGATCC 175420
Query 152208 CGCCAACTGCGCCACCTTCATGTC-CG-TCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265
||||| ||||| || |||| || || | |||| || || | ||||| | | |
Sbjct 175421 TGCCAATTGCGCAACTTTCACCTCACGTTTGTCA--TTGCGTTTTAAACAGGTGAACAAT 175478
Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCA 152299
|| || | |||| ||||| | |||||||| ||
Sbjct 175479 ACTTTTCTCTGGCCCGGTTTAAGACCGTCCATCA 175512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546740530857800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |