Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq6725 84.2 2e-11 >seq6725 Length=187087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 185/274 (68%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||| ||||||| | ||||| |||||||| || || || || | || || || || Sbjct 175241 CGTGAAAATGTATCTCGGACTGGCGGCATCCTTTCCGCCAGCAAGTCTTGTACCGAATTG 175300 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || ||| | || | |||| || ||| |||||||||||| || || | ||| | Sbjct 175301 ACCGATGGGTTGCAGCAAATTGATATTATTGCTGCCCACGAAATTTTGCGCGAGATTAAT 175360 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || || || || || || ||||| ||||| |||| ||||| |||| |||| Sbjct 175361 TATGGTCGCCATCAAGGACGTCTCGCCGTGATGATAAGCCGAATGCTCAGCGACCGATCC 175420 Query 152208 CGCCAACTGCGCCACCTTCATGTC-CG-TCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 ||||| ||||| || |||| || || | |||| || || | ||||| | | | Sbjct 175421 TGCCAATTGCGCAACTTTCACCTCACGTTTGTCA--TTGCGTTTTAAACAGGTGAACAAT 175478 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCA 152299 || || | |||| ||||| | |||||||| || Sbjct 175479 ACTTTTCTCTGGCCCGGTTTAAGACCGTCCATCA 175512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546740530857800