Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq5117 150 4e-31
seq6734 132 1e-25
seq52431 129 1e-24
seq68007 125 2e-23
seq5959 123 6e-23
seq1104 118 3e-21
seq69511 91.5 4e-13
seq5493 91.5 4e-13
seq514 91.5 4e-13
>seq5117
Length=2329582
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|||||||||| || | || | |||||||||||||| | ||||||||| | ||| ||
Sbjct 1167397 CGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTG 1167338
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || ||||| ||||| || || || ||||| | || ||||| ||||| |||||||||
Sbjct 1167337 CGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAGGAATACCT 1167278
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| |||||||| || || |||||| ||||| |||||||| | || || || ||
Sbjct 1167277 TCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAAT 1167218
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || || |||||||| | ||| | |||||
Sbjct 1167217 GTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177
Score = 134 bits (148), Expect = 3e-26
Identities = 156/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| |||| || | || ||||||||||| ||||| | || ||||| | || ||
Sbjct 1167854 ACGAAGCCTCAAAACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGT 1167795
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| || || || ||||| ||||| | || ||||| || || ||||| ||
Sbjct 1167794 GCGACCGTCTTCGAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCC 1167735
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||||||||| || || ||| |||| ||| ||||| |||||||| | || || || |
Sbjct 1167734 TTCCTTGTCCTGAAT-TTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCA 1167676
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTT 225698
| ||||| ||||| ||||||||||||||
Sbjct 1167675 ATGTGATGGTCTTTCCCGTCAAAGTTTT 1167648
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | ||| || || ||||| || |||| |||||| || | ||| || | ||
Sbjct 1164783 TCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGACAAGGTGCGTCC 1164724
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| |||||||| ||||||||||| | ||||| ||||| || || || ||||||||
Sbjct 1164723 GTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGTGGGATGCCTTCCTT 1164664
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| || |||||| ||| || || || ||||| || | || || || | || ||
Sbjct 1164663 GTCCTGAATCTTTGCCTTTACGTTCTCAATAGTGTCGGAAGCCTCGACCTCGAGGGTTAT 1164604
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || |||| || | |||||
Sbjct 1164603 GGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCAT 1164568
Score = 116 bits (128), Expect = 9e-21
Identities = 137/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| |||||||| || | |||||||| | | ||||| |||||||| ||||| || ||
Sbjct 1165220 GTTGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGGCCATCTTCGAGCTGTTTTCCG 1165161
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| | | || || || || || || |||||||| || || || ||| ||||
Sbjct 1165160 GCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATCCTGAAT-TTTGGCTTT 1165102
Query 225637 -ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
||| ||||| |||||||| | || || || || ||||| ||||| |||||||||||
Sbjct 1165101 GACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTTCCCGTCAAAGT 1165042
Query 225696 TTT 225698
|||
Sbjct 1165041 TTT 1165039
>seq6734
Length=2547638
Score = 132 bits (146), Expect = 1e-25
Identities = 99/116 (85%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|| ||||||||||| |||||||| || ||||| |||||||| |||||||| ||||||||
Sbjct 67546 AAGATTTGACCATCGGTAATAGAAATGACATTGGTAGGGATGTAAGCAGACACATCACCA 67487
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586
||||||||||| | |||||| || ||||| | ||||||||||| ||||||| |||
Sbjct 67486 GCTTGTGTTTCAATAACAGGCAAAGCTGTCAACGATCCACCACCTAAATTTTCATT 67431
>seq52431
Length=384
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || || || || || |||||||| ||||| | ||||| |||| | ||||
Sbjct 298 CGAAGACGCAAAACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTT 239
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||| || || || || ||||| || || || || || || || || ||||| ||
Sbjct 238 CTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGAATTCCC 179
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| ||||||||||| || ||||||| ||| || |||||||| | ||| || || |
Sbjct 178 TCTTTGTCTTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGG 119
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || ||||| | ||| || | ||| | |||||
Sbjct 118 GTGATGGTTTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 78
>seq68007
Length=840
Score = 125 bits (138), Expect = 2e-23
Identities = 163/223 (73%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||| | || | |||||| || ||||| ||||||| |||||||||| | |||
Sbjct 461 CGAAGTCGTAAAACTAAGTGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTC 402
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| || ||||||||||| ||||| |||||||| | || ||||| || || || || |||
Sbjct 401 CTACCGTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGCTGTTGATCAGGTGGGATTCCT 342
Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| || ||||| || ||| || || || ||| ||||| || || | ||| || || |
Sbjct 341 TCTTTATCTTGTAT-TTTGGCTTTTACGTTTTCTATGGTATCCGAAGCTTCAACTTCAAG 283
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || || ||||| || | ||| || | || | |||||||
Sbjct 282 GGTAATTGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGCATT 240
>seq5959
Length=1871824
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || || || || || || || || || |||| ||||| |||| | ||||
Sbjct 1420643 CGAAGACGTAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTT 1420702
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| |||||||| || ||||| ||||| ||||| || ||||| || || || || ||||||
Sbjct 1420703 CTTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCT 1420762
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| |||||||||||||| || ||| || || || || || | |||||| || |
Sbjct 1420763 TCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATAGTATCAGAAGCTTCCACCTCAAGA 1420822
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || | ||||| | || | ||||||
Sbjct 1420823 GTGATGGTTTTTCCAGTGAGGGTTTTCACAAAGATTTGCAT 1420863
>seq1104
Length=1074228
Score = 118 bits (130), Expect = 3e-21
Identities = 131/175 (75%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583
|||| || | |||||||||| | ||| | |||||| || ||||| || ||||||||||
Sbjct 391034 CTTTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAGA 390975
Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643
| || || ||||| || || || || || |||||||| |||||||| ||| ||| |
Sbjct 390974 TGAGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCT 390915
Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|||||||||| |||| || || || | || || ||||| ||||| | |||||
Sbjct 390914 CGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTT 390860
>seq69511
Length=15549
Score = 91.5 bits (100), Expect = 4e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||| ||||||||||||||||||||||| || || || ||||| ||||| |||||
Sbjct 720 TTCTGGATGTCCAAAAAATCAGAATAAATGTTGGTATAGAATGGGATCTCCTCCTCCTGA 661
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769
||||| || ||| || || ||||| | |||||||
Sbjct 660 GGGATCGAAGAAGGAGGTGTTTAAATTACGGTCAGTTA 623
>seq5493
Length=22391
Score = 91.5 bits (100), Expect = 4e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||| ||||||||||||||||||||||| || || || ||||| ||||| |||||
Sbjct 7661 TTCTGGATGTCCAAAAAATCAGAATAAATGTTGGTATAGAATGGGATCTCCTCCTCCTGA 7602
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769
||||| || ||| || || ||||| | |||||||
Sbjct 7601 GGGATCGAAGAAGGAGGTGTTTAAATTACGGTCAGTTA 7564
>seq514
Length=2723796
Score = 91.5 bits (100), Expect = 4e-13
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||||||||||||||||||||| ||||||||||| || ||||||||||| ||| | |||||
Sbjct 677548 TTCAGGATGACCAAAAAATCAAAATAAATGTTGGTAGAGGATAGGATCCCCT-CTCCTGA 677606
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATT 370758
|| | ||||| | | ||||| |||||
Sbjct 677607 AGGGTTAAAAATGAT-GTATTTAAATT 677632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1191469120160634
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