Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq5636 93.3 3e-14
>seq5636
Length=11654
Score = 93.3 bits (102), Expect = 3e-14
Identities = 164/238 (69%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
|||||| |||| || || || ||||| | |||||| || || || || || |||| ||
Sbjct 1111 CATGTCTTTGTATTCGGCGCCAAAATGTCGCCATTGAAAACCATAGACAGGCCCCAAATC 1170
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|||||||| | || |||||| ||||| ||| | | ||||| || | ||
Sbjct 1171 ACCCTCTTCTCGGTTGGTGAAGCCGTAAGAGTCCAGAAAAGCCCGCGAACCATTCTCATC 1230
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668
||| || | | ||||| || | | || || || ||||| || ||| ||| |||||
Sbjct 1231 CCAAATGTGAATACCCTTGTCTGTTAATTCCTTAGAATTTGTCGATCCTTTGATAAACCA 1290
Query 27669 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG-GAGGGGAAA 27725
|||||| ||||| || || || |||||| || ||||| || || || | ||||||
Sbjct 1291 CAGCAGTTCCTCAACCACCGCTCGCCAAAATACTCTCTTAGTTGTCAGTAATGGGAAA 1348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369194166317441
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |