Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq68007 147 5e-30 seq52431 143 6e-29 seq5959 138 3e-27 seq5117 136 9e-27 seq1104 122 2e-22 >seq68007 Length=840 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || ||||| || ||||||||||||||||||| | ||| || || |||||||| | Sbjct 443 TGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTCCTACCGTCTTCTAGCTGT 384 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 ||||| |||||||| | | ||| || || | | ||||||||| || ||||| ||||| Sbjct 383 TTCCCTGCGAAGATTAAACGCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGTATTTTG 324 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| || | |||| | | || ||| || |||||||| ||||| |||||||| ||| Sbjct 323 GCTTTTACGTTTTCTATGGTATCCGAAGCTTCAACTTCAAGGGTAATTGTTTTGCCGGTG 264 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 ||||||||||| || | |||||| Sbjct 263 AGAGTCTTCACAAAAATTTGCATT 240 >seq52431 Length=384 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || |||||||| || || || ||||| |||||||| |||| | |||||| ||||| || Sbjct 286 ACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCA 227 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| || || || || || | |||||| || | | ||||| || || ||||| Sbjct 226 AGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGG 167 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| || ||| | |||| |||||||| || |||||||| || || ||||| Sbjct 166 ATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGTTTTA 107 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||||||||||||||||| |||||| Sbjct 106 CCCGTGAGAGTCTTCACGAAGATCTGCAT 78 >seq5959 Length=1871824 Score = 138 bits (152), Expect = 3e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| |||||||| || ||||||||||| |||| | |||||| |||||| Sbjct 1420652 AGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTTCCATCT 1420711 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| || | ||||| || | | ||| ||||| || | Sbjct 1420712 TCCAGTTGCTTT--CCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCTTCTTTGT 1420769 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || ||||||| |||||| | || ||| || || |||||||| || | Sbjct 1420770 CTTGGATCTTAGCTTTGACATTCTCTATAGTATCAGAAGCTTCCACCTCAAGAGTGATGG 1420829 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| || ||||| |||| ||||| Sbjct 1420830 TTTTTCCAGTGAGGGTTTTCACAAAGATTTGCAT 1420863 Score = 114 bits (126), Expect = 3e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 151920 TGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGC 151979 || |||||||| |||| | |||||| ||||| || || ||| || || || || || Sbjct 1420451 TGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGA 1420510 Query 151980 CTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACG 152039 | |||||| || | | ||||| || || || || ||||| || ||| | |||| Sbjct 1420511 CGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATT 1420570 Query 152040 CTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACC 152099 |||||||| || |||||||||||||| |||||||| || ||||||||||| |||| Sbjct 1420571 GTGTCTGAAGCTTCAACTTCAAGAGTAATGGTTTTGCCAGTAAGAGTCTTCACAAAGATT 1420630 Query 152100 TGCATT 152105 |||||| Sbjct 1420631 TGCATT 1420636 >seq5117 Length=2329582 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || || ||||| || ||||||||||| | || ||||| ||||| Sbjct 1165236 GAGAACCAAATGCAATGTTGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGGCCATC 1165177 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| ||||||||||| | ||||||||| || | | |||||||||||| || Sbjct 1165176 TTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATC 1165117 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||||| ||||||| |||| | ||||||| ||| ||||| | || || || Sbjct 1165116 CTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGT 1165057 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| | ||| || || || | |||||| Sbjct 1165056 CTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1165024 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| || ||||| ||||| ||||| ||||| ||||| ||||| |||| |||||| Sbjct 1168081 CTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGGATATTGTAGTCGGACAAAGTT 1168022 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || || || || || || ||||| || || || || || || | | || || Sbjct 1168021 CGTCCGTCCTCGAGTTGCTTGCCAGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCC 1167962 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||||||| ||| ||| |||| | |||| ||| ||| || || || Sbjct 1167961 TCTTTGTCTTGAATTTTTGCTTTTACATTCTCGATCGTGTCCGAAGCCTCGACCTCCAGT 1167902 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||||||||| || || | |||||| Sbjct 1167901 GTGATAGTTTTCCCAGTGAGAGTCTTGACAAATATCTGCAT 1167861 Score = 104 bits (114), Expect = 5e-17 Identities = 155/219 (71%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTT-TTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| | || | ||| | ||||| || || ||| || |||||||| | || || | Sbjct 1167166 AGTCTCAAAACTAAATGTAACGTAGATTCCTTCTTGAATATTGTAATCAGACAATGTGCG 1167107 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || ||| ||||| ||||| | |||||||| || | | || || || Sbjct 1167106 TCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATACCCTC 1167047 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||||||||| || || |||| | |||||||| ||| || || | || Sbjct 1167046 TTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAATGT 1166987 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| |||||||| || ||||| | |||||| Sbjct 1166986 GATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTGCAT 1166948 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| || || ||||| ||||| ||||| | | || | || ||||| || Sbjct 1167836 ATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGACCGTCTTCGAGTTG 1167777 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | ||||| || || | | ||||||||||| || |||||||| Sbjct 1167776 TTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGAATTTT 1167717 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||||| |||| | ||||||| ||| ||||| | || || || || ||||| Sbjct 1167716 GGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTTCCCGT 1167657 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | ||| || || || | |||||| Sbjct 1167656 CAAAGTTTTGACAAAAATCTGCAT 1167633 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | || | ||| | || || |||||||| || |||||||| | || || | Sbjct 1167394 AGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGT 1167335 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || ||||| || ||| ||||| ||||| | ||||| || || | | || ||||| Sbjct 1167334 CCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAGGAATACCTTCT 1167275 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||||||||| || || |||| | |||||||| ||| || || | || Sbjct 1167274 TTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAATGTG 1167215 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | ||| || ||||| | |||||| Sbjct 1167214 ATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177 >seq1104 Length=1074228 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| || ||||||||||||| | ||| | |||||| || || ||| || ||||||| Sbjct 391034 CTTTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAGA 390975 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | |||| ||| || || | | |||||| ||||| || || || || || ||| ||| Sbjct 390974 TGAGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCT 390915 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||| || |||||| ||||| ||||| || || |||||||| || ||||| | Sbjct 390914 CGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACAA 390855 Query 152095 AGACCTGCAT 152104 ||| |||||| Sbjct 390854 AGATCTGCAT 390845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152793196017881