Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq68007 91.5 1e-13
seq5117 87.8 2e-12
>seq68007
Length=840
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||||||||| || || | ||||||||||| |||||| | ||| ||| |
Sbjct 240 AATGCAAATTTTTGTGAAGACTCTCACCGGCAAAACAATTACCCTTGAAGTTGAAGCTTC 299
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | | | | |||||| ||||| || |||||||| | || |||||
Sbjct 300 GGATACCATAGAAAACGTAAAAGCCAAAATACAAGATAAAGAAGGAATCCCACCTGATCA 359
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||| | | || | || || ||||| | ||||| || ||| | ||||||| ||
Sbjct 360 ACAGCGTTTAATCTTCGCAGGGAAACAGCTAGAAGACGGTAGGACTCTTTCCGATTACAA 419
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| ||||||||||| || ||||| || || || ||||| ||
Sbjct 420 CATCCAAAAGGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 467
>seq5117
Length=2329582
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 111175 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111234
|||||| ||||||| |||||||| ||| |||| |||||||||||| || ||||
Sbjct 1167936 GTAAAAGCAAAAATTCAAGACAAAGAGGGCATTCCTCCCGATCAACAAAGACTGATTTTC 1167995
Query 111235 GCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCT 111294
|| ||||| ||| | || || |||| || |||| || ||||| || |||||||||
Sbjct 1167996 GCTGGCAAGCAACTCGAGGACGGACGAACTTTGTCCGACTACAATATCCAGAAAGAATCT 1168055
Query 111295 ACACTACA 111302
||||| ||
Sbjct 1168056 ACACTTCA 1168063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421453856182936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |