Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5959 140 2e-28
seq52431 125 5e-24
seq1104 122 6e-23
seq5117 111 1e-19
seq68007 105 5e-18
>seq5959
Length=1871824
Score = 140 bits (154), Expect = 2e-28
Identities = 176/239 (74%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||| || | | || || ||||| || |||||| |||||||||||
Sbjct 1420630 TTGCATTCCTCCTCGAAGACGTAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTA 1420689
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| ||| | | || ||||| ||||| || |||||||||| ||| ||||||||
Sbjct 1420690 GTCGGAGAGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATC 1420749
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| ||| | |||||| || || ||||| |||| | ||| |||| || || | |
Sbjct 1420750 TGGAGGGATACCTTCTTTGTCTTGGATCTT-AGCTTTGACATTCTCTATAGTATCAGAAG 1420808
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||||||| | || || || ||||| |||||||| ||||| |||||||||||||||
Sbjct 1420809 CTTCCACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCACAAAGATTTGCATGATG 1420867
Score = 89.7 bits (98), Expect = 4e-13
Identities = 133/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 44153 TGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCA 44210
|| |||||||| |||| ||||| | | || || || || || || ||||| ||||
Sbjct 1420451 TGAATGTTGTAGTCGGAAAGAGTT--CTACCATCCTCAAGTTGTTTACCAGCAAAAATCA 1420508
Query 44211 AACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTA 44270
|||||||||||||| ||| | || || || ||| || || ||||| || |||
Sbjct 1420509 GACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTA 1420568
Query 44271 TGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGA 44330
| ||||| | | ||| || || | ||||| || || || || || |||||||| ||||
Sbjct 1420569 TTGTGTCTGAAGCTTCAACTTCAAGAGTAATGGTTTTGCCAGTAAGAGTCTTCACAAAGA 1420628
Query 44331 TTTGCAT 44337
|||||||
Sbjct 1420629 TTTGCAT 1420635
>seq52431
Length=384
Score = 125 bits (138), Expect = 5e-24
Identities = 171/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||| || | ||| ||||| ||||| ||| |||||||| ||||||||
Sbjct 311 TTGCATTCCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTA 252
Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| ||||| | | || || || || || || ||||| |||| ||||||||||
Sbjct 251 GTCGGAAAGAGTT--CTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGA 194
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| ||| | || || || || || || ||||| || |||| ||||| |
Sbjct 193 TCTGGAGGAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAA 134
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||| || || | || || || || |||||||| |||||||||||||| ||||||
Sbjct 133 GCTTCAACTTCAAGGGTGATGGTTTTACCCGTGAGAGTCTTCACGAAGATCTGCATG 77
>seq1104
Length=1074228
Score = 122 bits (134), Expect = 6e-23
Identities = 147/196 (75%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 44148 CCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| || ||||||||||||| || |||| | || |||||||| || || || |||
Sbjct 391035 CCTTTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAG 390976
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|| | ||||| ||||||| || | || ||||| ||| ||||| ||| || ||
Sbjct 390975 ATGAGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTT-AACATT 390917
Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | |||||||||| || || ||||| | ||||| ||||| ||||||||||| |||||
Sbjct 390916 CTCGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCAC 390857
Query 44326 GAAGATTTGCATGATG 44341
||||| ||||| |||
Sbjct 390856 AAAGATCTGCATAATG 390841
>seq5117
Length=2329582
Score = 111 bits (122), Expect = 1e-19
Identities = 170/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | || ||| | |||| |||||| || ||||| ||||| ||||| ||
Sbjct 1164798 CATTCCGCCGCGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTC 1164739
Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | || || || |||| || |||||||| || || ||||||||||| ||||| || |
Sbjct 1164738 AGACAAGGTG-CGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAG 1164680
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284
|| | |||||||| ||| ||||| ||| | | |||| | || ||||||| |
Sbjct 1164679 GTGGGATGCCTTCCTTGTCCTGAATCTT-TGCCTTTACGTTCTCAATAGTGTCGGAAGCC 1164621
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| ||||| | || || |||||||| || | ||||| || || || |||||| ||
Sbjct 1164620 TCGACCTCGAGGGTTATGGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCATGGTG 1164564
Score = 105 bits (116), Expect = 5e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| || || || ||||| | ||| || |||| || || ||||| || ||||||
Sbjct 1164986 TCCTTCTGAATATTATAATCTGAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAG 1164927
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
||||| | || ||||| | ||| | ||||| || ||| || ||| |||| | |||
Sbjct 1164926 ATCAATCTTTGTTGATCCGGAGGGATGCCTTCTTTGTCCTGAATTTTC-GCTTTGACGTT 1164868
Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | || ||||| | | ||| ||||||| ||||| ||||||||||| | ||| || ||
Sbjct 1164867 CTCGATCGTGTCCGAAGCTTCTACCTCCAAAGTAATTGTCTTTCCCGTCAAGGTTTTAAC 1164808
Query 44326 GAAGATTTGCAT 44337
|||||| |||||
Sbjct 1164807 GAAGATCTGCAT 1164796
Score = 105 bits (116), Expect = 5e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | |||||||| |||| || | ||| || ||||| || ||||||||
Sbjct 1167407 CATACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATC 1167348
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | | ||| |||| || ||||| || |||||||||||||| | ||| ||||| |
Sbjct 1167347 AGACAATGTGCGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGG 1167288
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||| || || || ||| |||| | |||| | || ||||| | | |
Sbjct 1167287 AGGAATACCTTCTTTGTCTTGAATTTTCGCCTTC-ACGTTCTCGATTGTGTCTGAAGCCT 1167229
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || |||||||| || | || || ||||| || |||||
Sbjct 1167228 CGACCTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || ||||| |||| || || ||| |||||||| ||||| |||||
Sbjct 1167863 CATACCGCCACGAAGCCTCAAAACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATC 1167804
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| |||| || || || || || ||||||||||| | ||| |||||||
Sbjct 1167803 AGACAGTGTGCGACCGTCTTCGAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGG 1167744
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| | | || |||| | ||| | || ||||| | | |
Sbjct 1167743 AGGAATTCCTTCCTTGTCC-TGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCT 1167685
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || |||| || || ||||||||||| | || || || || || |||||
Sbjct 1167684 CAACTTCCAATGTGATGGTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1167633
Score = 95.1 bits (104), Expect = 9e-15
Identities = 163/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTT-TTGGATGTTGTAAT 44165
||| || || | |||||||| || | || | ||| ||||| ||| || |||||||
Sbjct 1167179 CATACCACCGCGAAGTCTCAAAACTAAATGTAACGTAGATTCCTTCTTGAATATTGTAAT 1167120
Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | | | ||| |||| || || || || |||||||||||||| | ||||||||| |
Sbjct 1167119 CAGACAATGTGCGTCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGG 1167060
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284
||| | ||| || || || || ||| |||| | |||| | || ||||| | |
Sbjct 1167059 GAGGAATACCCTCTTTGTCTTGAATTTTCGCCTTC-ACGTTCTCGATTGTGTCTGAAGCC 1167001
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| || || || || || ||||| || || ||||| || |||||
Sbjct 1167000 TCGACCTCCAATGTGATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTGCAT 1166948
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|| || || ||||||||||| | ||||| | || | || || ||||| || ||||| |
Sbjct 1165214 TCTTTCTGAATGTTGTAATCAGATAGAGTTCG-GC-CATCTTCGAGCTGTTTTCCGGCGA 1165157
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
||||||| | ||||||||||| ||| | |||||||| ||| | | || |||| |
Sbjct 1165156 AGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATCC-TGAATTTTGGCTTTGACA 1165098
Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
||| | || ||||| | | || || |||| || || ||||||||||| | || ||
Sbjct 1165097 TTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTTCCCGTCAAAGTTTTG 1165038
Query 44324 ACGAAGATTTGCAT 44337
|| || || |||||
Sbjct 1165037 ACAAAAATCTGCAT 1165024
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| || || || ||||| | ||| || |||| || || ||||| || ||||||
Sbjct 1167595 TCCTTCTGAATATTATAATCTGAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAG 1167536
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
||||| | ||||||||| | ||| | ||||| || ||| | | || |||| || ||
Sbjct 1167535 ATCAACCTCTGCTGATCCGGAGGGATTCCTTCTTTGTCC-TGAATTTTAGCTTTAACATT 1167477
Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | || ||||| | | ||| || |||| || ||||| || || || || || || ||
Sbjct 1167476 CTCGATCGTGTCTGATGCTTCGACTTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGAC 1167417
Query 44326 GAAGATTTGCAT 44337
|| || |||||
Sbjct 1167416 AAAAATCTGCAT 1167405
>seq68007
Length=840
Score = 105 bits (116), Expect = 5e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|||||||||||||||||||||| || | |||| || ||||| ||||| || |||
Sbjct 431 TCCTTTTGGATGTTGTAATCGGAAAGAGTCCTACCGTCTTCTAGCTGTTTCCCTGCGAAG 372
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-T 44265
|| |||||||| ||||| | || | ||||| || || ||| || |||| | | |
Sbjct 371 ATTAAACGCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGTAT-TTTGGCTTTTACGTT 313
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||||| || | | ||| || || | ||||| || || || ||||| ||||||||
Sbjct 312 TTCTATGGTATCCGAAGCTTCAACTTCAAGGGTAATTGTTTTGCCGGTGAGAGTCTTCAC 253
Query 44326 GAAGATTTGCAT 44337
|| ||||||||
Sbjct 252 AAAAATTTGCAT 241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359685428620287
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