Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5959 185 2e-41
seq68007 172 1e-37
seq5117 172 1e-37
seq1104 143 6e-29
>seq5959
Length=1871824
Score = 185 bits (204), Expect = 2e-41
Identities = 165/207 (80%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || |||||||| ||||| |||||||| ||||| || ||||||||| || ||
Sbjct 1420860 CAAATCTTTGTGAAAACCCTCACTGGAAAAACCATCACTCTTGAGGTGGAAGCTTCTGAT 1420801
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| |||||| ||||| || ||||||||||| |||||||| || ||||||
Sbjct 1420800 ACTATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATCCCTCCAGATCAGCAA 1420741
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| || || ||||||||||| ||||| |||| || ||| ||
Sbjct 1420740 CGTCTGATCTTTGCTGGAAAGCAACTGGAAGATGGAAGAACTCTCTCCGACTACAACATC 1420681
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || ||||| ||||| |||
Sbjct 1420680 CAGAAGGAGTCTACACTTCATCTAGTT 1420654
Score = 116 bits (128), Expect = 9e-21
Identities = 132/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| ||||| || || ||||| || || || || || ||| ||||||
Sbjct 1420632 CAAATCTTTGTGAAGACTCTTACTGGCAAAACCATTACTCTTGAAGTTGAAGCTTCAGAC 1420573
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || || || ||||||||||| ||||| ||||| || |||||
Sbjct 1420572 ACAATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCAGATCAGCAG 1420513
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || || || || || ||||| || || ||||| || |||||| |||| || |||
Sbjct 1420512 CGTCTGATTTTTGCTGGTAAACAACTTGAGGATGGTAGAACTCTTTCCGACTACAAC 1420456
>seq68007
Length=840
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| |||||||| || ||||| || ||||| || || ||| || ||
Sbjct 244 CAAATTTTTGTGAAGACTCTCACCGGCAAAACAATTACCCTTGAAGTTGAAGCTTCGGAT 303
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| || || || || |||||||||||||| || || || ||
Sbjct 304 ACCATAGAAAACGTAAAAGCCAAAATACAAGATAAAGAAGGAATCCCACCTGATCAACAG 363
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || |||||||| ||||| || ||||||||| ||||||| ||| ||
Sbjct 364 CGTTTAATCTTCGCAGGGAAACAGCTAGAAGACGGTAGGACTCTTTCCGATTACAACATC 423
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| ||||| ||||| || | ||||| ||||
Sbjct 424 CAAAAGGAATCTACACTCCACTTAGTTTTACGACT 458
Score = 154 bits (170), Expect = 4e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| |||||||| || || ||||| |||||||| || || ||| ||||||
Sbjct 16 CAGATCTTCGTAAAAACTCTTACGGGTAAAACCATCACCCTTGAAGTTGAAGCTTCAGAC 75
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || || || ||||||||||| ||||| || || || || |||
Sbjct 76 ACAATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCAACAA 135
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || ||||| || || ||||| || |||||| |||| |||||| |
Sbjct 136 CGTTTGATTTTTGCTGGCAAACAACTGGAGGATGGCAGAACTCTTTCCGACTATAACATT 195
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||| ||||||||||| ||||| ||| ||
Sbjct 196 CAAAAGGAATCAACACTTCATCTGGTTCTG 225
>seq5117
Length=2329582
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| |||||| | |||||||| || ||||| | ||||| || ||||||
Sbjct 1167180 CAGATTTTCGTCAAAACTTTAACAGGAAAGACCATCACATTGGAGGTCGAGGCTTCAGAC 1167239
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||| || || ||||| ||||||||||| || ||||| || || ||
Sbjct 1167240 ACAATCGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCTCCCGATCAACAG 1167299
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| |||||||||||||||||||| ||| | || | | ||||| || |
Sbjct 1167300 AGATTGATCTTTGCCGGAAAACAGCTCGAAGACGGACGCACATTGTCTGATTACAATATT 1167359
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||||||||| ||| ||||| | |||||||||||
Sbjct 1167360 CAAAAAGAATCCACATTGCATTTGGTTTTGAGACT 1167394
Score = 170 bits (188), Expect = 5e-37
Identities = 162/207 (78%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||| | || ||||| || ||||| | || || || ||||||
Sbjct 1165027 CAGATTTTTGTCAAAACTTTGACGGGAAAGACCATCACATTGGAAGTTGAGGCGTCAGAC 1165086
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| |||||| || |||||||| || |||||||||||||| || |||||
Sbjct 1165087 ACGATCGAGAATGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCTCCAGATCAGCAG 1165146
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||||||||||||||||||||||||||| | ||||| | ||||| ||| |
Sbjct 1165147 AGGTTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCGAACTCTATCTGATTACAACATT 1165206
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| |||||||||||| ||||| | |||
Sbjct 1165207 CAGAAAGAATCAACATTGCATTTGGTT 1165233
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||| | || ||||| || ||||| | || || || ||||||
Sbjct 1167636 CAGATTTTTGTCAAAACTTTGACGGGAAAGACCATCACATTGGAAGTTGAGGCGTCAGAC 1167695
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| |||||| || ||||||||||| |||||||| ||||| || || ||
Sbjct 1167696 ACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATTCCTCCAGATCAACAG 1167755
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || |||||||| |||||||| || | || || | ||||||||| |
Sbjct 1167756 AGATTGATCTTTGCTGGAAAACAACTCGAAGACGGTCGCACACTGTCTGATTATAACATT 1167815
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| ||||| || |||||| | |||||||| ||
Sbjct 1167816 CAAAAGGAATCCACTCTGCATTTGGTTTTGAGGCT 1167850
Score = 152 bits (168), Expect = 1e-31
Identities = 164/216 (76%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| ||||||||||| || ||||| ||||| | ||||| || ||||||
Sbjct 1166951 CAGATTTTCGTCAAAACTCTCACTGGCAAAACTATCACATTGGAGGTCGAGGCTTCAGAC 1167010
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||| || || ||||| |||||||| || || ||||| || |||||
Sbjct 1167011 ACAATCGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCTCCCGATCAGCAG 1167070
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||||||||| |||||||| ||| | || | | ||||| || |
Sbjct 1167071 AGATTGATCTTTGCCGGAAAACAACTCGAAGACGGACGCACATTGTCTGATTACAATATT 1167130
Query 178104 CAA-AAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||| || ||||| || | ||| | |||||||||||
Sbjct 1167131 CAAGAAGGAATCTACGTTACATTTAGTTTTGAGACT 1167166
Score = 150 bits (166), Expect = 4e-31
Identities = 159/208 (76%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || ||||| || || || ||||||||||| || || || ||| ||||||
Sbjct 1167408 CAGATTTTTGTCAAAACACTTACTGGTAAAACGATCACTCTGGAAGTCGAAGCATCAGAC 1167467
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| || ||| || ||||||||||||||||||||||||||||| |||||
Sbjct 1167468 ACGATCGAGAATGTTAAAGCTAAAATTCAGGACAAAGAAGGAATCCCTCCGGATCAGCAG 1167527
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || ||||| || || ||||| || | ||||| | |||||||| |
Sbjct 1167528 AGGTTGATCTTTGCTGGAAAGCAACTTGAAGACGGCCGTACTCTCTCAGATTATAATATT 1167587
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || ||||| || |||| |||| ||
Sbjct 1167588 CAGAAGGAATCGACCTTGCA-CTTGGTT 1167614
Score = 145 bits (160), Expect = 2e-29
Identities = 160/209 (77%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || | || ||||| || || ||||||||||| || || |||
Sbjct 1164571 CAGATTTTTGTAAAGACGTTGACCGGAAAGACCATAACCCTCGAGGTCGAGGCTTCCGAC 1164630
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || ||||||||||||||| ||||| ||||| || |||||||||
Sbjct 1164631 ACTATTGAGAACGTAAAGGCAAAGATTCAGGACAAGGAAGGCATCCCACCTGACCAGCAA 1164690
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | |||||||| ||||| ||||| ||||| ||| | || |||| | || || || |
Sbjct 1164691 CGTTTGATCTTCGCTGGAAAGCAGCTTGAAGACGGACGCAC-CTTGTCTGACTACAATAT 1164749
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131
||| || |||||||| || || |||| ||
Sbjct 1164750 CCAGAAGGAATCAACCCTTCA-CTTGGTT 1164777
Score = 141 bits (156), Expect = 2e-28
Identities = 157/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| | || ||||| || || || | ||||| ||| || |||
Sbjct 1164799 CAGATCTTCGTTAAAACCTTGACGGGAAAGACAATTACTTTGGAGGTAGAAGCTTCGGAC 1164858
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||||||| || ||||||||||||||||| ||||||||||| || |||
Sbjct 1164859 ACGATCGAGAACGTCAAAGCGAAAATTCAGGACAAAGAAGGCATCCCTCCGGATCAACAA 1164918
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||| || || ||||| || | ||||| | |||||||| |
Sbjct 1164919 AGATTGATCTTTGCTGGAAAGCAACTTGAAGACGGCCGTACTCTCTCAGATTATAATATT 1164978
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || ||||| || |||| |||| ||
Sbjct 1164979 CAGAAGGAATCGACCTTGCA-CTTGGTT 1165005
Score = 95.1 bits (104), Expect = 3e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 178019 AGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
||| || || ||||| || ||||| || | ||||| ||||||||||| || ||||||||
Sbjct 1166818 AGAGGGTATTCCTCCCGATCAGCAGAGATTGATCTTTGCCGGAAAACAACTTGAAGATGG 1166877
Query 178079 AAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
| || | | ||||||||| | || |||||||| ||| ||||| | |||||||||||
Sbjct 1166878 TCGCACATTATCTGATTATAACATTCAGAAAGAATCCACATTGCATTTGGTTTTGAGACT 1166937
>seq1104
Length=1074228
Score = 143 bits (158), Expect = 6e-29
Identities = 144/187 (77%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || |||||||| ||||| || || || || ||||| ||||| || ||| |||
Sbjct 390848 CAGATCTTTGTGAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTAGAGGCCTCCGAC 390907
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| |||||||| || |||||||| || || || ||
Sbjct 390908 ACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGATCAACAG 390967
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || |||||||| || ||||| | |||||| ||||||| ||| |
Sbjct 390968 CGGCTCATCTTCGCTGGCAAACAGCTGGAGGATGGGCGCACTCTTTCCGATTACAACATT 391027
Query 178104 CAAAAAG 178110
|| ||||
Sbjct 391028 CAGAAAG 391034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202659145332134
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