Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1772 98.7 1e-15 >seq1772 Length=243193 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | ||||| || || || || || |||||| || ||||||| |||||||||| Sbjct 41289 GGTCCCTAATATATGTGTCAATAAGAAGAGAGTACATCTCAGAGTGTACATTCTCCATGG 41230 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 ||||||| || || || ||||||| ||||| | | ||||||||| |||| |||| Sbjct 41229 CTATCTGGAAACCATAGAAGCATCTAGCTTCAGTCACTTGAACTTCTTGAGAGAAACGTT 41170 Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405 | | || ||||| || || || || ||| || || || || |||| | |||||| | Sbjct 41169 CAACCAGGTTTTCATTGACAATCCCATCGGAAGCAGCAAAGAAAGCCAGCACATGCTTGA 41110 Query 17406 TGAA 17409 | || Sbjct 41109 TAAA 41106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517530099509280