Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1772 105 7e-18 >seq1772 Length=243193 Score = 105 bits (116), Expect = 7e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| || ||||| || | | |||||| || ||||||| ||||| ||||||||||| Sbjct 41281 ATATATGTGTCAATAAGAAGAGAGTACATCTCAGAGTGTACATTCTCCATGGCTATCTGG 41222 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||||||||||| ||| || | | ||| ||||| | || ||||| ||||| Sbjct 41221 AAACCATAGAAGCATCTAGCTTCAGTCACTTGAACTTCTTGAGAGAAACGTTCAACCAGG 41162 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 || ||||| || || || || |||||||| || |||| | ||||| || || Sbjct 41161 TTTTCATTGACAATCCCATCGGAAGCAGCAAAGAAAGCCAGCACATGCTTGATAAA 41106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511399083138720