Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1772 102 8e-17 >seq1772 Length=243193 Score = 102 bits (112), Expect = 8e-17 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 16504 AATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTG 16563 |||||| || || || || | | ||||| || || || | ||||||||| |||||||| Sbjct 41282 AATATATGTGTCAATAAGAAGAGAGTACATCTCAGAGTGTACATTCTCCATGGCTATCTG 41223 Query 16564 AAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC-AGAGTAAAACCTTTCTGCTA 16622 |||||||| |||||||||||||| | | ||| ||||| ||| | || | ||| | | Sbjct 41222 GAAACCATAGAAGCATCTAGCTTCAGTCACTTGAACTTCTTGAG-AGAAACGTTCAACCA 41164 Query 16623 AGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAA 16680 |||||| || || || |||||| ||| ||||| || || || | || || ||||| Sbjct 41163 GGTTTTCATTGACAATCCCATCGGAAGCAGCAAAGAAAGCCAGCACATGCTTGATAAA 41106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462498147765600