Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq890 98.7 8e-16 >seq890 Length=2258411 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 20353 GACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCT 20412 || |||||||| | |||| || |||||| | |||| || | ||||||||||||| Sbjct 27464 GATAGAAGAATGCTGATATGTGCATGGAACCCATCAGATCTGAGTAAAATGGCTTTGCCT 27523 Query 20413 CCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTA 20471 ||||||||| || ||| || || | || | || | |||| || || | |||| Sbjct 27524 CCATGTCATTGTCT-TGCTCAGTTCCATGTATCAGATGGTAAATTATCTTGCCTGCTGTA 27582 Query 20472 TCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCT 20531 ||| | ||| |||||||| ||||| ||||||||||||||||| || || | | || Sbjct 27583 CCAAAGGAGCGCAGATATGGGTCTGGGAGTTCCTTTCAATATTGCCAGCTACTCTTTACT 27642 Query 20532 TACGTATATGATTGCACATGTTACAG 20557 || | |||||||||||| | |||| Sbjct 27643 CACTCACATGATTGCACATATCACAG 27668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399172343328220