Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30]
2,396 sequences; 514,225,903 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1843 143 2e-29
seq1732 134 1e-26
seq1046 122 7e-23
seq535 107 2e-18
>seq1843
Length=1107702
Score = 143 bits (158), Expect = 2e-29
Identities = 208/292 (71%), Gaps = 5/292 (2%)
Strand=Plus/Minus
Query 20446 GCATATTTTGTAGAATGGGGCGTTTATCCTAGACAATTTCCCGTCGACAAGGTACCCGTT 20505
|| || ||||| |||||||| || || || || | || ||||| ||| || ||| |
Sbjct 492104 GCCTACTTTGTTGAATGGGGTGTCTACCCAAGGAAGTTCCCCGTTGACCGTGTGCCCATC 492045
Query 20506 CCCAATTTGTCTCATCTGCTATATGGCTTTGTGCCAATTTGCGGCGGAGATGGTATCAAC 20565
|||||| | |||||||||| ||||| || | ||||| || || |||||||| ||||||
Sbjct 492044 CCCAATCTTACTCATCTGCTGTATGGTTTCATCCCAATCTGTGGAGGAGATGGCATCAAC 491985
Query 20566 GACGCGTTAAAGTTG-TCCCAGCCGGATAGTTATTTAGCTTTGCAACGTTCGTGCGCGGG 20624
||| || ||| | || || | |||| |||| |||| | || ||| ||
Sbjct 491984 GACAGTTTGAAGGAGATCGAAGGC----AGTTTCCAAGCTCTGCAGAGATCATGCAGCGG 491929
Query 20625 CCGAGATAATTTTAAAGTTGCCATACACGATCCTTGGGCCGCTCTACAGAAACCACAAAA 20684
| | || |||| || || | || |||||||||||||| || || || |||||||| ||
Sbjct 491928 CAGGGAAGATTTCAAGGTATCTATCCACGATCCTTGGGCTGCACTCCAAAAACCACAGAA 491869
Query 20685 AGGAGTATCCTCTTGGAACGAACCGTACAAAGGAAACTTTGGTCAGTTGATG 20736
|| | || || |||||||| || ||||| || ||||| || || ||||||
Sbjct 491868 GGGTTTGTCATCCTGGAACGAGCCTTACAAGGGTAACTTCGGCCAATTGATG 491817
>seq1732
Length=1186882
Score = 134 bits (148), Expect = 1e-26
Identities = 171/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || | || ||| | ||| | || |||||||||||||||||||| ||
Sbjct 784781 ATACCGCCACGGAGACGCAGAACAAGATGGAGGGTGGATTCTTTTTGAATGTTGTAGTCA 784722
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||| | || || || ||| |||| | || || || || |||
Sbjct 784721 GACAGTGTGCGGCCGTCTTCCAACTGCTTTCCTGCGAAGATCAATCGTTGCTGATCTGGA 784662
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
|||||||||||||| || ||| ||| | |||| | | ||||| |||||||| | ||
Sbjct 784661 GGAATGCCTTCTTTATCTTGAAT-TTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTC 784603
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384
||| || | || | ||||| || |||| |||||||| |||||||||||||
Sbjct 784602 GACTTCAAGCGTAATAGTTTTACCCGTCAAGGTTTTTACGAAAATCTGCATGG 784550
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || | ||||| || |||||||| || |||||||| ||
Sbjct 785237 ATACCACCTCGCAGACGGAGCACAAGATGTAGTGTGGATTCTTTCTGGATGTTGTAGTCA 785178
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || |||||| | || || ||||| |||| |||||||| ||||| |||
Sbjct 785177 GAAAGAGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGA 785118
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| ||||| |||| | ||||| ||||| | | |||
Sbjct 785117 GGAATGCCTTCTTTGTCTTGGATCTTGGCCTTTACATTTTCAATTGTGTCAGAAGGTTCA 785058
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | |||||||| || ||||| || ||||| ||||||||
Sbjct 785057 ACTTCGAGAGTGATGGTTTTGCCAGTAAGAGTCTTGACAAATATCTGCAT 785008
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|||||||| || | ||| || || || | || |||||||||||||| ||||| |||
Sbjct 787506 CCGCCACGAAGACGCAAGACCAAGTGCAGGGTGGATTCTTTTTGAATATTGTAGTCGGAA 787447
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| ||| || ||||| | || || |||||| |||| |||||||| ||||| || ||
Sbjct 787446 AGAGTGCGTCCGTCTTCCAACTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGGGGG 787387
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|||||||| ||||| ||||| ||| | | |||| || || | | || ||
Sbjct 787386 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGCTCAACC 787327
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | || ||||| |||| || ||||| || ||||||||
Sbjct 787326 TCCAGAGTAATAGTCTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 787280
Score = 105 bits (116), Expect = 6e-18
Identities = 162/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || | ||| | || |||||||||||||| ||||| |||
Sbjct 787281 ATACCACCTCGCAGACGGAGCACAAGATGAAGGGTGGATTCTTTTTGAATATTGTAGTCG 787222
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| ||| ||| || | |||||| ||||| |||| |||||||| ||||| ||
Sbjct 787221 GACAAAGTGCGACCATCCTCTAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGG- 787163
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || ||||| ||| | | ||||| |||||| | | |||
Sbjct 787162 GGGATACCCTCCTTATCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCAGATGGTTCA 787103
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || || ||||| || || || ||||||||
Sbjct 787102 ACCTCCAGAGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 787053
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || |||| ||| || | || | || |||||||| |||||||| |||||
Sbjct 785009 ATACCACCTCGGAGTCGCAATACAAGGTGAAGGGTCGATTCTTTCTGAATGTTATAATCT 784950
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| || | ||||||||||||| |||| | ||||| || || ||
Sbjct 784949 GAGAGGGTGCGACCATCCTCTAATTGTTTACCAGCGAAGATCAATCGCTGCTGATCTGGG 784890
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
||||| || |||||||| || ||| | ||| | | || | ||||| | | ||
Sbjct 784889 GGAATACCCTCTTTGTCTTGGAT-TTTAGCCTTAACATTCTCGATAGTGTCTGAAGGCTC 784831
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | ||| || || || |||||||| || |||||||||||
Sbjct 784830 AACTTCAAGGGTAATCGTCTTACCAGTGAGAGTTTTCACGAAAATCTGCAT 784780
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || | ||| | || || ||||| || ||||| |||||
Sbjct 786599 ATACCACCTCGCAGACGGAGCACAAGATGGAGGGTTGACTCTTTCTGGATGTTATAATCT 786540
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| || || || |||||| | || |||||||| ||||| ||
Sbjct 786539 GACAATGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCTGGG 786480
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||| ||||||| || || ||||| ||||| | ||||| |||||| | | ||
Sbjct 786479 GGA-TGCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTGTCAGACGGCTCA 786421
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || |||||||||||
Sbjct 786420 ACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTAACGAAAATCTGCAT 786371
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || | ||| | || |||||||| || ||||| |||||
Sbjct 786372 ATACCACCTCGCAGACGGAGCACAAGATGAAGGGTTGATTCTTTCTGGATGTTATAATCT 786313
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| || || || |||||| | || |||||||| ||||| ||
Sbjct 786312 GACAATGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCTGGG 786253
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||| ||||||| || || ||||| ||||| | ||||| |||||| | | ||
Sbjct 786252 GGA-TGCCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTGTCAGACGGCTCA 786194
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || || || || || || |||||||||||
Sbjct 786193 ACCTCCAGAGTGATGGTCTT-CCAGTAAGGGTCTTAACGAAAATCTGCAT 786145
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/230 (69%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || | ||| | || |||||||||||||| ||||| ||
Sbjct 785692 ATACCACCTCGCAGACGGAGCACAAGATGGAGGGTGGATTCTTTTTGAATATTGTAGTCA 785633
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||| | ||||| || || ||||||||||||| ||||| ||
Sbjct 785632 GAAAGAGTGCGTCCGTCTTCTAACTGTTTTCCGGCAAAGATGAGACGCTGCTGGTCAGG- 785574
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| |||||||| ||||| ||||| ||| | | |||| || || | | ||
Sbjct 785573 GGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGCTCA 785514
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| |||| || ||||| |||||||||||
Sbjct 785513 ACCTCCAGAGTAATAGTCTTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 785464
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/197 (71%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||| ||| | ||| || ||||| ||||| || |||
Sbjct 786113 GTTGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCGTCTTCCAGTTGCTTGCCA 786054
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || |||||||| ||||| || ||| ||||||| ||||| ||||| |||
Sbjct 786053 GCGAAAATTAGACGCTGCTGGTCAGGGGGA-TGCCTTCCTTGTCCTGGATCTTGGCTTTG 785995
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| || || | | || || |||| || | || ||||| |||| ||
Sbjct 785994 ACGTTCTCAATAGTATCCGAAGGCTCAACCTCCAGAGTAATAGTCTTGCCAGTCAAGGTC 785935
Query 114366 TTTACAAAAATCTGCAT 114382
||||| |||||||||||
Sbjct 785934 TTTACGAAAATCTGCAT 785918
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/230 (69%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || | ||| | || |||||||| || |||||||| ||
Sbjct 786826 ATACCTCCTCGCAGACGGAGCACAAGATGAAGTGTGGATTCTTTCTGGATGTTGTAGTCA 786767
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||| | ||||| || || ||||||||||||| ||||| ||
Sbjct 786766 GAAAGAGTGCGTCCGTCTTCCAACTGTTTTCCGGCAAAGATGAGACGCTGCTGGTCAGG- 786708
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| |||||||| ||||| ||||| ||| | | |||| || || | | |||
Sbjct 786707 GGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGTTCA 786648
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| |||| || ||||| |||||||||||
Sbjct 786647 ACCTCCAGAGTAATAGTCTTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 786598
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/230 (69%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || | ||| | || |||||||| || |||||||| ||
Sbjct 785919 ATACCACCTCGCAGACGGAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCC 785860
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || |||||| | || || |||||| ||||||||||||| ||||| ||
Sbjct 785859 GAAAGAGTGCGTCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGG- 785801
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||||| ||| | | |||| || || | | ||
Sbjct 785800 GGGATACCTTCCTTGTCCTGGATCTTGGCTTTGACATTCTCAATAGTATCCGAAGGCTCA 785741
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| |||| || ||||| || ||||||||
Sbjct 785740 ACCTCCAGAGTAATAGTCTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 785691
>seq1046
Length=465179
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| ||||| ||||| ||||||||||| | |||||| |||||| | |||||||||
Sbjct 190210 GTGGATTCCTTTTGGATGTTGTAATCAGAGAGAGTACGGCCATCTTCCAACTGTTTACCA 190151
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| ||||| || ||||| || || || || |||||||| |||||| ||
Sbjct 190150 GCGAAGATAAGACGTTGCTGGTCTGGTGGGATTCCCTCTTTGTCCTGGATCTTTGCCTTC 190091
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| | |||||| | || ||| || || | ||| | ||||| || || || |||
Sbjct 190090 ACATTTTCGATGGTGTCTGAGGCTTCCACCTCGAGGGTGATGGTTTTACCCGTGAGGGTT 190031
Query 114366 TTTACAAAAATCTGCAT 114382
||||| || ||||||||
Sbjct 190030 TTTACGAAGATCTGCAT 190014
>seq535
Length=1858795
Score = 107 bits (118), Expect = 2e-18
Identities = 163/231 (71%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAA-TGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211
|||||||| | ||| | | ||||||| || | |||||||| || ||||||||||| ||
Sbjct 56970 ATACCGCCTCTTAGACGAAGAACTAAAATGCAGTGTAGATTCCTTCTGAATGTTGTAGTC 57029
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
| | || || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 57030 GGAGAGTGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGG 57089
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
|| || || |||||||| ||| || ||| | | ||| | ||||| | | |||
Sbjct 57090 TGGGATTCCCTCTTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCTGAAGGTTC 57149
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || | || | || || |||||||| || || ||||| || |||||
Sbjct 57150 GACCTCGAGTGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 57200
Score = 107 bits (118), Expect = 2e-18
Identities = 163/231 (71%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAA-TGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211
|||||||| | ||| | | ||||||| || | |||||||| || ||||||||||| ||
Sbjct 1714018 ATACCGCCTCTTAGACGAAGAACTAAAATGCAGTGTAGATTCCTTCTGAATGTTGTAGTC 1713959
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
| | || || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 1713958 GGAGAGTGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGG 1713899
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
|| || || |||||||| ||| || ||| | | ||| | ||||| | | |||
Sbjct 1713898 TGGGATTCCCTCTTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCTGAAGGTTC 1713839
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || | || | || || |||||||| || || ||||| || |||||
Sbjct 1713838 GACCTCGAGTGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 1713788
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 57650 ATACCACCACGCAGACGCAATACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCG 57709
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||||| | || ||||||||| |||| || || || ||||| ||
Sbjct 57710 GAGAGAGTGCGGCCATCTTCA-GCTGCTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGT 57768
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||| ||||||| ||| || ||| | | ||| | ||||| | | ||||
Sbjct 57769 GGGATCCCT-CTTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCTGAAGGTTCG 57827
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || ||||||||||| || ||||| || |||||
Sbjct 57828 ACCTCGAGTGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATTTGCAT 57877
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 1713338 ATACCACCACGCAGACGCAATACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCG 1713279
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||||| | || ||||||||| |||| || || || ||||| ||
Sbjct 1713278 GAGAGAGTGCGGCCATCTTCA-GCTGCTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGT 1713220
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||| ||||||| ||| || ||| | | ||| | ||||| | | ||||
Sbjct 1713219 GGGATCCCT-CTTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCTGAAGGTTCG 1713161
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || ||||||||||| || ||||| || |||||
Sbjct 1713160 ACCTCGAGTGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATTTGCAT 1713111
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227
|| ||||||||||| | ||||||||||||||||| || || ||| | || || |
Sbjct 56757 CTTAAAACTAAATGCAGTGTAGATTCTTTTTGAATATTATAGTCGGAAAGTGTGCGGCCA 56816
Query 114228 TCTTCAAGTTG-TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
||||| ||||| || || ||| |||| | | |||||||| || ||||| || |||||
Sbjct 56817 TCTTCCAGTTGCTTGGCCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATTCCCTCTTT 56876
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| ||| ||| ||||| | ||| | |||||| | | || || || | || |
Sbjct 56877 GTCTTGAATTTTTGCTTTTACATTTTCGATGGTGTCTGATGGCTCAACTTCTAAAGTTAT 56936
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| || |||| ||||| ||||| || |||||
Sbjct 56937 TGTTTT-CCAGTCAAGGTTTTGACAAAGATTTGCAT 56971
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227
|| ||||||||||| | ||||||||||||||||| || || ||| | || || |
Sbjct 1714231 CTTAAAACTAAATGCAGTGTAGATTCTTTTTGAATATTATAGTCGGAAAGTGTGCGGCCA 1714172
Query 114228 TCTTCAAGTTG-TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
||||| ||||| || || ||| |||| | | |||||||| || ||||| || |||||
Sbjct 1714171 TCTTCCAGTTGCTTGGCCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATTCCCTCTTT 1714112
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| ||| ||| ||||| | ||| | |||||| | | || || || | || |
Sbjct 1714111 GTCTTGAATTTTTGCTTTTACATTTTCGATGGTGTCTGATGGCTCAACTTCTAAAGTTAT 1714052
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| || |||| ||||| ||||| || |||||
Sbjct 1714051 TGTTTT-CCAGTCAAGGTTTTGACAAAGATTTGCAT 1714017
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 57422 ATACCACCACGCAGACGCAATACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCG 57481
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 57482 GAGAGTGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGT 57541
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || |||||||| || || ||| | | ||||| ||||| | || ||
Sbjct 57542 GGGATTCCCTCTTTGTCTTGGATTTTAGCTTTGACGTTTTCAATTGTGTCAGAGGGCTCA 57601
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || |||| ||||| ||||| || |||||
Sbjct 57602 ACTTCCAGTGTGATAGTTTTACCAGTCAAGGTTTTGACAAAGATTTGCAT 57651
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 1713566 ATACCACCACGCAGACGCAATACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCG 1713507
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 1713506 GAGAGTGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGT 1713447
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || |||||||| || || ||| | | ||||| ||||| | || ||
Sbjct 1713446 GGGATTCCCTCTTTGTCTTGGATTTTAGCTTTGACGTTTTCAATTGTGTCAGAGGGCTCA 1713387
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || |||| ||||| ||||| || |||||
Sbjct 1713386 ACTTCCAGTGTGATAGTTTTACCAGTCAAGGTTTTGACAAAGATTTGCAT 1713337
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 57876 ATACCACCACGCAGACGCAATACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCG 57935
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 57936 GAGAGTGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGT 57995
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || |||||||| ||| ||| | ||| | ||| | ||||| | | |||
Sbjct 57996 GGAATTCCCTCTTTGTCCTGAAT-TTTGGCTTTGAATTTTCGATTGTGTCTGAAG-GTCG 58053
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || |||||||| || || ||||| || |||||
Sbjct 58054 ACCTCGAGTGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 58103
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 1713112 ATACCACCACGCAGACGCAATACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCG 1713053
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 1713052 GAGAGTGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGT 1712993
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || |||||||| ||| ||| | ||| | ||| | ||||| | | |||
Sbjct 1712992 GGAATTCCCTCTTTGTCCTGAAT-TTTGGCTTTGAATTTTCGATTGTGTCTGAAG-GTCG 1712935
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || |||||||| || || ||||| || |||||
Sbjct 1712934 ACCTCGAGTGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 1712885
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/218 (69%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 58102 ATACCACCACGCAGACGCAATACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCG 58161
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 58162 GAGAGAGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGT 58221
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || |||||||| ||| || ||| | | ||| | ||||| | | ||||
Sbjct 58222 GGGATTCCCTCTTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCTGAAG-TTCG 58280
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | || | || || |||||||| || || ||
Sbjct 58281 ACCTCGAGTGTGATGGTCTTACCGGTCAGGGTCTTGAC 58318
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/218 (69%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || || || | || || || || ||||||||||| |||
Sbjct 1712886 ATACCACCACGCAGACGCAATACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCG 1712827
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || |||||| || || ||||| ||| |||| || || || ||||| ||
Sbjct 1712826 GAGAGAGTGCGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGT 1712767
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || |||||||| ||| || ||| | | ||| | ||||| | | ||||
Sbjct 1712766 GGGATTCCCTCTTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCTGAAG-TTCG 1712708
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | || | || || |||||||| || || ||
Sbjct 1712707 ACCTCGAGTGTGATGGTCTTACCGGTCAGGGTCTTGAC 1712670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420122131550352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |