Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2157 250 1e-60 seq2095 156 2e-32 seq446 156 2e-32 seq1732 134 5e-26 seq1645 125 3e-23 seq535 125 3e-23 seq2040 107 8e-18 >seq2157 Length=87636 Score = 250 bits (276), Expect = 1e-60 Identities = 479/696 (69%), Gaps = 14/696 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| | ||||| ||| | ||||| || | ||| || || ||||| | || |||| ||| Sbjct 53351 GCAGTCGGAATAGATTTAGGAACGACATATTCTTGCGTTGGTGTCTGGCAGCATGGTAAT 53292 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || || |||||||| ||||||||||| || || ||||| || | || ||||||| Sbjct 53291 GTGGATATTATAGCTAATGACCAAGGGAATCGCACAACTCCGTCTTATGTTGCTTTTACG 53232 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTA--AATCAATGGTAAATTCAAATGCCAAAA 451091 || |||| | || | || | || || | ||||| ||| || ||| | | | Sbjct 53231 GACACAGAGCGGCTCATTGGAGATGCCGCAAAGAATCA--GGTTGCTTTGAATCCAAGTA 53174 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 | ||| ||| ||||| |||||| | || || |||| || ||||||| | ||||| Sbjct 53173 ATACAATATTCGATGCGAAACGTCTCATCGGTCGTAAGTTTGATGATCCCAAGATACAAC 53114 Query 451152 AAGAGAAAAAATTCTTTTC-TTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 |||| || || | || || |||||||| | ||||| || | |||||| Sbjct 53113 AAGATCTCAAGCACTGGCCATTCAGA-GTAGTAAACGATGGCGGAAAACCAAAAATTCAA 53055 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATT-TCATCTATGGTTCT 451269 || | || ||||| |||| ||| |||||| || ||||||||| || | |||||||| Sbjct 53054 GTTGAATACAAAGGCAAAACCAAACGTTTTGCACCAGAAGAAATTAGCAGC-ATGGTTCT 52996 Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329 | ||| ||||| || | |||||| |||| | || | ||||| | || || || Sbjct 52995 CATTAAGATGAAGGATATTGCAGAAGCATATTTGGGAAAACAAGTTAAAAAGGCTGTTAT 52936 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 || || || ||||| || |||||| | ||| | ||||| |||||||| || || || Sbjct 52935 AACAGTACCTGCTTACTTTAATGATTCTCAAAGACAAGCTACTAAAGACGCTGGGGCAAT 52876 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||||| ||||| || |||||||| ||||| ||||| ||||| ||||| | || ||||| Sbjct 52875 TGCTGGATTAAACGTCCTTCGAATAATTAACGAACCAACAGCTGCTGCGTTGGCTTATGG 52816 Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 || ||| || | | | || || ||| | || ||||||| ||||||| || Sbjct 52815 TCT-GGATAA--AGATCTCAAAGGCGAGCGAAACGTGTTGATATTTGACCTTGGTGGCGG 52759 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAAC 451566 |||| ||| || | || ||||||| || || | |||||||| || ||||| Sbjct 52758 AACTTTCGATGTATCAATCCTGACAATTGATGAAGGTTCTTTGTTTGAAGTTAAAGCAAC 52699 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | ||| || ||||||||||| ||||||||| |||| Sbjct 52698 CGCTGGGGACACTCATCTAGGTGGTGAAGATTTTGA 52663 >seq2095 Length=232875 Score = 156 bits (172), Expect = 2e-32 Identities = 455/694 (66%), Gaps = 20/694 (3%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| |||||||||||||||||||| |||| || ||||| || || | || | || || Sbjct 195004 AGCTATTGGAATTGATCTTGGAACAACCTACTCGTGTGTTGGAGTGTGGCAGCACGGGAA 194945 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 ||| ||||| || |||||||||||||| ||||||||||| |||| || || || Sbjct 194944 TGTGGAAATCATCGCAAATGACCAAGGCAACCGAACTACTCCGTCATACGTCGCGTTCAC 194885 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAAA 451092 ||| |||| | | | || | || |||||| ||| || |||| || Sbjct 194884 AGATACAGAGCGGTTGATTGGAGATGCAGCTAAAAACCAGGTCGCCCTCAACCCCAACAA 194825 Query 451093 CACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAA 451152 |||||||| |||||| ||||| | || ||||| | || ||| || | | ||| | Sbjct 194824 CACAGTATTTGATGCCAAACGACTCATCGGCCGCAAGTTTGACGACCCGAAGATCCAACA 194765 Query 451153 AGAGA--AAAAATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 || | | ||| | ||| | || ||||| | || || ||| | || | Sbjct 194764 GGACATGCAGCATTGGCCCTTC----AAAGTTATAAATGACTGTGGCAAACCCAAGATAC 194709 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAAT-TTCATCTATGGTT 451267 |||| || | ||| || ||||| || | || || || || ||||| || | ||||| Sbjct 194708 AAGTTAACTTTAAGGGAGAAACAAAGAAGTTCGCGCCGGAGGAAATCAGCAGC-ATGGTG 194650 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || || ||||| || || ||||| || | || | |||| ||||| || Sbjct 194649 TTAACAAAGATGAAGGAGACTGCAGAGGCTTACCTCGGAACCTCAGTGCGAGATGCTGTC 194590 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || || || || || || ||||| || ||||||| ||||| ||||| |||||||| Sbjct 194589 ATCACAGTCCCAGCATACTTCAACGACTCACAACGACAAGCCACTAAGGATGCAGGTGCC 194530 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 || ||||| | || || || | || || ||||| |||||||| || || || || || Sbjct 194529 ATCGCTGGGCTTAACGTGCTAAGGATCATCAATGAGCCTACAGCTGCCGCCCTCGCCTAC 194470 Query 451448 GGACT--AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 || || | |||||| || || ||| |||| | || |||||||| |||||| Sbjct 194469 GGTCTCGACAAAAATCTCAA-----AGGCGAACGAAATGTGCTAATATTTGATCTTGGTG 194415 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGG 451562 | || || |||| || | || | || || || || | ||||| ||| || Sbjct 194414 GCGGCACATTTGATGTGTCCATTCTAACCATCGATGAAGGCTCTCTGTTTGAGGTACGGG 194355 Query 451563 CAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 | || ||||| || || || || |||||||| Sbjct 194354 CGACTGCCGGTGACACACACCTTGGTGGTGAAGA 194321 >seq446 Length=1585405 Score = 156 bits (172), Expect = 2e-32 Identities = 455/694 (66%), Gaps = 20/694 (3%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| |||||||||||||||||||| |||| || ||||| || || | || | || || Sbjct 26735 AGCTATTGGAATTGATCTTGGAACAACCTACTCGTGTGTTGGAGTGTGGCAGCACGGGAA 26676 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 ||| ||||| || |||||||||||||| ||||||||||| |||| || || || Sbjct 26675 TGTGGAAATCATCGCAAATGACCAAGGCAACCGAACTACTCCGTCATACGTCGCGTTCAC 26616 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAAA 451092 ||| |||| | | | || | || |||||| ||| || |||| || Sbjct 26615 AGATACAGAGCGGTTGATTGGAGATGCAGCTAAAAACCAGGTCGCCCTCAACCCCAACAA 26556 Query 451093 CACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAA 451152 |||||||| |||||| ||||| | || ||||| | || ||| || | | ||| | Sbjct 26555 CACAGTATTTGATGCCAAACGACTCATCGGCCGCAAGTTTGACGACCCGAAGATCCAACA 26496 Query 451153 AGAGA--AAAAATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 || | | ||| | ||| | || ||||| | || || ||| | || | Sbjct 26495 GGACATGCAGCATTGGCCCTTC----AAAGTTATAAATGACTGTGGCAAACCCAAGATAC 26440 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAAT-TTCATCTATGGTT 451267 |||| || | ||| || ||||| || | || || || || ||||| || | ||||| Sbjct 26439 AAGTTAACTTTAAGGGAGAAACAAAGAAGTTCGCGCCGGAGGAAATCAGCAGC-ATGGTG 26381 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || || ||||| || || ||||| || | || | |||| ||||| || Sbjct 26380 TTAACAAAGATGAAGGAGACTGCAGAGGCTTACCTCGGAACCTCAGTGCGAGATGCTGTC 26321 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || || || || || || ||||| || ||||||| ||||| ||||| |||||||| Sbjct 26320 ATCACAGTCCCAGCATACTTCAACGACTCACAACGACAAGCCACTAAGGATGCAGGTGCC 26261 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 || ||||| | || || || | || || ||||| |||||||| || || || || || Sbjct 26260 ATCGCTGGGCTTAACGTGCTAAGGATCATCAATGAGCCTACAGCTGCCGCCCTCGCCTAC 26201 Query 451448 GGACT--AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 || || | |||||| || || ||| |||| | || |||||||| |||||| Sbjct 26200 GGTCTCGACAAAAATCTCAA-----AGGCGAACGAAATGTGCTAATATTTGATCTTGGTG 26146 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGG 451562 | || || |||| || | || | || || || || | ||||| ||| || Sbjct 26145 GCGGCACATTTGATGTGTCCATTCTAACCATCGATGAAGGCTCTCTGTTTGAGGTACGGG 26086 Query 451563 CAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 | || ||||| || || || || |||||||| Sbjct 26085 CGACTGCCGGTGACACACACCTTGGTGGTGAAGA 26052 >seq1732 Length=1186882 Score = 134 bits (148), Expect = 5e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 391042 ATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTG 391101 |||| | ||| | |||||||| ||||| |||| |||||||||||||| ||||| || | Sbjct 784544 ATATCACCATGCAGATTTTCGTAAAAACCTTGACGGGTAAAACTATTACGCTTGAAGTCG 784603 Query 391102 AATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTC 391161 | |||| || | ||||||| | ||||| |||||||||||||| ||||| ||||||| Sbjct 784604 AGCCATCCGACACCATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGCATTCCTC 784663 Query 391162 CTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGG 391221 | ||||| ||||| || || ||| |||| || || | ||||| || | || || | | Sbjct 784664 CAGATCAGCAACGATTGATCTTCGCAGGAAAGCAGTTGGAAGACGGCCGCACACTGTCTG 784723 Query 391222 ATTATAATATTGATAAGGA 391240 | || || ||| | || || Sbjct 784724 ACTACAACATTCAAAAAGA 784742 Score = 120 bits (132), Expect = 1e-21 Identities = 150/203 (74%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || || ||||| || || || ||||| || ||||| | ||| Sbjct 786145 ATGCAGATTTTCGTTAAGACCCTTACTGG-AAGACCATCACTCTGGAGGTTGAGCCGTCT 786203 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | | ||| || || |||||||||||||| | ||| || || || Sbjct 786204 GACACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGCA-TCCCCCAGACCAG 786262 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| |||||||| | || || || || |||||||| | || ||| | |||||||| Sbjct 786263 CAGCGTCTAATTTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACATTGTCAGATTATAAC 786322 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | || || |||| ||||| Sbjct 786323 ATCCAGAAAGAATCAACCCTTCA 786345 Score = 120 bits (132), Expect = 1e-21 Identities = 149/203 (73%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || || ||||| || || || ||||| || ||||| | ||| Sbjct 786371 ATGCAGATTTTCGTTAAGACCCTTACTGGCAAGACCATCACTCTGGAGGTTGAGCCGTCT 786430 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | | ||| || || |||||||||||||| | ||| || || || Sbjct 786431 GACACCATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGCA-TCCCCCAGACCAG 786489 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| |||||||| | || || || || |||||||| | || ||| | |||||||| Sbjct 786490 CAGCGTCTAATTTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACATTGTCAGATTATAAC 786549 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | || || |||| || || Sbjct 786550 ATCCAGAAAGAGTCAACCCTCCA 786572 Score = 102 bits (112), Expect = 3e-16 Identities = 145/203 (71%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || ||||| || |||||| ||||| Sbjct 787053 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACTCTGGAGGTTGAACCATCT 787112 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | ||| || || ||||||||||| || | ||| || || || Sbjct 787113 GACACCATTGAAAACGTCAAAGCCAAGATCCAAGATAAGGAGGGTA-TCCCCCAGACCAG 787171 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || |||||| | || ||||| | |||||| | || || ||| Sbjct 787172 CAGCGTCTTATCTTTGCTGGCAAACAATTAGAGGATGGTCGCACTTTGTCCGACTACAAT 787231 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | || || | || ||||| Sbjct 787232 ATTCAAAAAGAATCCACCCTTCA 787254 Score = 98.7 bits (108), Expect = 4e-15 Identities = 157/224 (70%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| || ||||||||||| || ||||| | || Sbjct 785918 ATGCAGATTTTCGTAAAGACCTTGACTGGCAAGACTATTACTCTGGAGGTTGAGCCTTCG 785977 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||| || || || || |||||||| | ||| ||||| || Sbjct 785978 GATACTATTGAGAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCA-TCCCCCTGACCAG 786036 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| |||||||| | || || ||||| ||||| ||| | ||| | | || || || Sbjct 786037 CAGCGTCTAATTTTCGCTGGCAAGCAACTGGAAGACGGACGCACTCTTTCCGACTACAAC 786096 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || |||| || || | || | | |||||||| Sbjct 786097 ATCCAGAAAGAGTCAACCCTCCATCTTGTGCTCCGTCTGAGAGG 786140 Score = 89.7 bits (98), Expect = 2e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || ||||||||||| || ||||| | || Sbjct 787280 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAGACTATTACTCTGGAGGTTGAGCCTTCG 787339 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||| || || || || |||||||| || || ||||| || Sbjct 787340 GATACTATTGAGAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 787399 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || | ||||| ||| | ||| | | || || ||| Sbjct 787400 CAGCGTCTTATCTTCGCTGGCAAGCAGTTGGAAGACGGACGCACTCTTTCCGACTACAAT 787459 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | || || | || || ||||| || || Sbjct 787460 ATTCAAAAAGAATCCACCCTGCACTTGGTCTT 787491 Score = 87.8 bits (96), Expect = 7e-12 Identities = 142/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| || ||||||||||| || |||||| | || Sbjct 786598 ATGCAGATTTTCGTAAAGACCTTGACTGGCAAGACTATTACTCTGGAGGTTGAACCTTCG 786657 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||| || || || || |||||||| | ||| ||||| || Sbjct 786658 GATACTATTGAGAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCA-TCCCCCTGACCAG 786716 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || ||||| | ||||| ||| | ||| | | || || || Sbjct 786717 CAGCGTCTCATCTTTGCCGGAAAACAGTTGGAAGACGGACGCACTCTTTCTGACTACAAC 786776 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | || || | |||||||| Sbjct 786777 ATCCAGAAAGAATCCACACTTCA 786799 Score = 86.0 bits (94), Expect = 2e-11 Identities = 129/182 (71%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || ||||||||||| || ||||| | || Sbjct 785691 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAGACTATTACTCTGGAGGTTGAGCCTTCG 785750 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | ||| || || || || |||||||| | ||| ||||| || Sbjct 785751 GATACTATTGAGAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTA-TCCCCCTGACCAG 785809 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || | ||||||||| | ||| | |||| || || Sbjct 785810 CAGCGTCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGACGCACTCTTTCGGACTACAAC 785869 Query 391230 AT 391231 || Sbjct 785870 AT 785871 Score = 84.2 bits (92), Expect = 9e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| || ||||||||||| || ||||| | || Sbjct 785464 ATGCAGATTTTCGTAAAGACCTTGACTGGCAAGACTATTACTCTGGAGGTTGAGCCTTCG 785523 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||| || || || || |||||||| | ||| ||||| || Sbjct 785524 GATACTATTGAGAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCA-TCCCCCTGACCAG 785582 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || ||||| | ||||| ||| | ||| | | || || ||| Sbjct 785583 CAGCGTCTCATCTTTGCCGGAAAACAGTTAGAAGACGGACGCACTCTTTCTGACTACAAT 785642 Query 391230 ATTGATAAGGA 391240 ||| | || || Sbjct 785643 ATTCAAAAAGA 785653 >seq1645 Length=457589 Score = 125 bits (138), Expect = 3e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 451226 GAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAA 451285 |||| |||| ||| |||| |||||||||||||| ||| || | | |||||||| ||| Sbjct 14104 GAAAAGAAAAGGTTTTCTCCGGAAGAAATTTCATCCATGATTTTAAGTAAAATGAGAGAC 14163 Query 451286 ACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTAT 451345 || ||| |||| | ||| | |||| ||||| || | ||||| || |||||| Sbjct 14164 GTTGCTGAAACATATTTGGGTGGGACGGTTAAGGATGCTGTTGTCACTGTGCCGGCTTAT 14223 Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405 |||||||| | || | || || || || ||| | || || |||||| | |||||| Sbjct 14224 TTCAATGACTCCCAGAGACAGGCCACCAAGGATTCTGGTGTAATAGCTGGTCTTAATGTT 14283 Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 || |||| |||||||||||||| || || ||||| || || || || Sbjct 14284 CTCAGAATCATTAATGAACCTACGGCCGCCGCTCTTGCCTACGGTCT 14330 Score = 100 bits (110), Expect = 1e-15 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 |||||||||||||| || |||||||| |||||||| ||||| |||||||||| ||||| Sbjct 14954 AATCCTGATGAAGCCGTAGCATATGGAGCTGCAGTACAAGCGGCTATTCTAAGTGGTTCT 15013 Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110 | ||| | | | || | | || || || ||||| ||||| || || || || Sbjct 15014 AAGGATACACGTCTTGCTGAAGTATTATTGGTCGACGTAACGCCTCTCTCACTGGGTATT 15073 Query 452111 GAAACAGCTGGTGGAATGATGAC 452133 |||||||||||||| ||||||| Sbjct 15074 GAAACAGCTGGTGGGGTGATGAC 15096 >seq535 Length=1858795 Score = 125 bits (138), Expect = 3e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| ||||||| ||||| || ||| | || ||||| |||| Sbjct 56971 ATGCAAATCTTTGTCAAAACCTTGACTGG-AAAACAATAACTTTAGAAGTTGAGCCATCA 56913 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| ||| | | ||| |||||||||||| || || |||||||| ||||| ||| Sbjct 56912 GACACCATCGAAAATGTAAAAGCAAAAATTCAAGACAAAGAGGGAATTCCACCTGACCAA 56853 Query 391170 CAACGTTTAATTTTCTCAGG-GAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || ||| |||| || ||||| |||||||| | || | | || ||||| Sbjct 56852 CAAAGATTGATCTTCGCAGGCCAAGCAACTGGAAGATGGCCGCACACTTTCCGACTATAA 56793 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAG 391264 |||| | || || | ||||| || ||||| ||||| Sbjct 56792 TATTCAAAAAGAATCTACACTGCATTTAGTTTTAAG 56757 Score = 125 bits (138), Expect = 3e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| ||||||| ||||| || ||| | || ||||| |||| Sbjct 1714017 ATGCAAATCTTTGTCAAAACCTTGACTGG-AAAACAATAACTTTAGAAGTTGAGCCATCA 1714075 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| ||| | | ||| |||||||||||| || || |||||||| ||||| ||| Sbjct 1714076 GACACCATCGAAAATGTAAAAGCAAAAATTCAAGACAAAGAGGGAATTCCACCTGACCAA 1714135 Query 391170 CAACGTTTAATTTTCTCAGG-GAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || ||| |||| || ||||| |||||||| | || | | || ||||| Sbjct 1714136 CAAAGATTGATCTTCGCAGGCCAAGCAACTGGAAGATGGCCGCACACTTTCCGACTATAA 1714195 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAG 391264 |||| | || || | ||||| || ||||| ||||| Sbjct 1714196 TATTCAAAAAGAATCTACACTGCATTTAGTTTTAAG 1714231 Score = 107 bits (118), Expect = 8e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| |||||||||||||||| || || || ||||| | ||| Sbjct 57651 ATGCAAATCTTTGTCAAAACCTTGACTGGTAAAACTATCACACTGGAAGTTGAGCCCTCT 57592 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | ||| ||||| ||||| || || ||||| || ||||| || Sbjct 57591 GACACAATTGAAAACGTCAAAGCTAAAATCCAAGACAAAGAGGGAATCCCACCTGACCAG 57532 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || ||| | || || || || |||||||| | || | | || || || Sbjct 57531 CAACGACTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACACTCTCCGACTACAAC 57472 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| | || |||||||| ||||| Sbjct 57471 ATTCAGAAGGAGTCCACTCTTCACTTGGTATT 57440 Score = 107 bits (118), Expect = 8e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| |||||||||||||||| || || || ||||| | ||| Sbjct 1713337 ATGCAAATCTTTGTCAAAACCTTGACTGGTAAAACTATCACACTGGAAGTTGAGCCCTCT 1713396 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | ||| ||||| ||||| || || ||||| || ||||| || Sbjct 1713397 GACACAATTGAAAACGTCAAAGCTAAAATCCAAGACAAAGAGGGAATCCCACCTGACCAG 1713456 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || ||| | || || || || |||||||| | || | | || || || Sbjct 1713457 CAACGACTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACACTCTCCGACTACAAC 1713516 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| | || |||||||| ||||| Sbjct 1713517 ATTCAGAAGGAGTCCACTCTTCACTTGGTATT 1713548 >seq2040 Length=491583 Score = 107 bits (118), Expect = 8e-18 Identities = 247/371 (67%), Gaps = 6/371 (2%) Strand=Plus/Plus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 |||| ||||||||||||||||| || |||||||||| || |||||||| ||||| || Sbjct 198438 AAAATCTTTGCTCCTGAAGAAATCTCTGCTATGGTTCTCACCAAAATGAAGGAAACCGCT 198497 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 || || |||| || || | || || | || || || ||||| ||||| Sbjct 198498 GAGGCTTACCTTGGCAAGAAGGTGACCCACGCTGTCGTAACAGTCCCTGCTTACTTCAAC 198557 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 || || || || ||||| || || || || || ||| || ||| | | || | || Sbjct 198558 GACGCTCAGCGTCAAGCCACCAAGGACGCTGGTGCTATCGCCGGTCTTCAGGTCATGAGA 198617 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA 451471 || || || || ||||| || || ||| | || || || || | || || || | Sbjct 198618 ATCATCAACGAGCCTACCGCCGCCGCTATCGCTTACGGTCTTGACAA---GAAGGA---A 198671 Query 451472 GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTT 451531 | || || || | | |||||||| || ||||| || || || ||| | || Sbjct 198672 GGCGAGAAGAACGTGCTCGTATTTGACTTGGGTGGTGGTACCTTCGACGTGTCTCTGCTC 198731 Query 451532 TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGT 451591 | || || |||| || ||||||||| || ||||||||||| ||||| | || ||| Sbjct 198732 ACCATCGACAATGGAGTGTTTGAAGTAGTAGCCACCAATGGTGACACTCACTTGGGTGGT 198791 Query 451592 GAAGATATTGA 451602 || || |||| Sbjct 198792 GAGGACTTTGA 198802 Score = 107 bits (118), Expect = 8e-18 Identities = 247/371 (67%), Gaps = 6/371 (2%) Strand=Plus/Minus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 |||| ||||||||||||||||| || |||||||||| || |||||||| ||||| || Sbjct 333246 AAAATCTTTGCTCCTGAAGAAATCTCTGCTATGGTTCTCACCAAAATGAAGGAAACCGCT 333187 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 || || |||| || || | || || | || || || ||||| ||||| Sbjct 333186 GAGGCTTACCTTGGCAAGAAGGTGACCCACGCTGTCGTAACAGTCCCTGCTTACTTCAAC 333127 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 || || || || ||||| || || || || || ||| || ||| | | || | || Sbjct 333126 GACGCTCAGCGTCAAGCCACCAAGGACGCTGGTGCTATCGCCGGTCTTCAGGTCATGAGA 333067 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA 451471 || || || || ||||| || || ||| | || || || || | || || || | Sbjct 333066 ATCATCAACGAGCCTACCGCCGCCGCTATCGCTTACGGTCTTGACAA---GAAGGA---A 333013 Query 451472 GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTT 451531 | || || || | | |||||||| || ||||| || || || ||| | || Sbjct 333012 GGCGAGAAGAACGTGCTCGTATTTGACTTGGGTGGTGGTACCTTCGACGTGTCTCTGCTC 332953 Query 451532 TCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGT 451591 | || || |||| || ||||||||| || ||||||||||| ||||| | || ||| Sbjct 332952 ACCATCGACAATGGAGTGTTTGAAGTAGTAGCCACCAATGGTGACACTCACTTGGGTGGT 332893 Query 451592 GAAGATATTGA 451602 || || |||| Sbjct 332892 GAGGACTTTGA 332882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975657747914768