Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2157 244 9e-59 seq2095 168 5e-36 seq446 168 5e-36 seq1732 125 6e-23 seq1645 109 4e-18 seq535 104 2e-16 seq1835 95.1 1e-13 seq1057 95.1 1e-13 >seq2157 Length=87636 Score = 244 bits (270), Expect = 9e-59 Identities = 382/544 (70%), Gaps = 2/544 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || |||||||||||||| |||||| ||| |||||||| ||||| ||||||| || || Sbjct 53345 GGAATAGATTTAGGAACGACATATTCTTGCGTTGGTGTCTGGCAGCATGGTAATGTGGAT 53286 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 ||||| || ||||| ||||| || | || ||||| ||||||||| |||| ||||| || Sbjct 53285 ATTATAGCTAATGACCAAGGGAATCGCACAACTCCGTCTTATGTTGCTTTTACGGACACA 53226 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | |||| ||||| ||||| |||| | || ||||| | ||||| || Sbjct 53225 GAGCGGCTCATTGGAGATGCCGCAAAGAATCAGGTTGCTTTGAATCCAAGTAATACAATA 53166 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 || ||||| |||||| | || || | | ||| ||||| | | | || |||| | Sbjct 53165 TTCGATGCGAAACGTCTCATCGGTCGTAAGTTTGATGATCCCAAGATACAACAAGATCTC 53106 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 ||||| ||||| ||| | | || || | | |||||||| | ||| ||| | | Sbjct 53105 AAGCACTGGCCATTCAGAGTAGTAAACGATGGCGGAAAACCAAAAATTCAAGTTGAATAC 53046 Query 550298 GAAGGATCTGTTAAACAATTTTCACCAGAACAAATT-TCATCTATGGTTTTAATGAAAAT 550356 |||| |||| ||| |||||||| ||||| || | |||||| | || || || Sbjct 53045 AAAGGCAAAACCAAACGTTTTGCACCAGAAGAAATTAGCAGC-ATGGTTCTCATTAAGAT 52987 Query 550357 GAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACC 550416 ||| | | || || | | | || || |||||| | || || ||||| ||||| Sbjct 52986 GAAGGATATTGCAGAAGCATATTTGGGAAAACAAGTTAAAAAGGCTGTTATAACAGTACC 52927 Query 550417 AGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACT 550476 || || |||||||| || ||| | |||||||||||||| ||||| ||||||||| | Sbjct 52926 TGCTTACTTTAATGATTCTCAAAGACAAGCTACTAAAGACGCTGGGGCAATTGCTGGATT 52867 Query 550477 TAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || || ||||| || || || ||||| || |||||||| | || ||||| || ||||| Sbjct 52866 AAACGTCCTTCGAATAATTAACGAACCAACAGCTGCTGCGTTGGCTTATGGTCTGGATAA 52807 Query 550537 ACAT 550540 | || Sbjct 52806 AGAT 52803 Score = 102 bits (112), Expect = 7e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 361703 AGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCC 361762 ||||||||||| || | ||||||||||||||||||||||||| || || || | ||| Sbjct 52813 AGACCATAAGCCAACGCAGCAGCTGTTGGTTCGTTAATTATTCGAAGGACGTTTAATCCA 52872 Query 361763 GCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACA 361822 || ||| || ||| ||| ||||| | ||| | ||||||||| || ||||| || Sbjct 52873 GCAATTGCCCCAGCGTCTTTAGTAGCTTGTCTTTGAGAATCATTAAAGTAAGCAGGTACT 52932 Query 361823 GTAATCACTGCTTTTTCAACTTGT 361846 || || || || |||| ||||||| Sbjct 52933 GTTATAACAGCCTTTTTAACTTGT 52956 >seq2095 Length=232875 Score = 168 bits (186), Expect = 5e-36 Identities = 401/601 (67%), Gaps = 20/601 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||| | ||||| || || |||||||| || ||||| | || || Sbjct 195004 AGCTATTGGAATTGATCTTGGAACAACCTACTCGTGTGTTGGAGTGTGGCAGCACGGGAA 194945 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| || || ||||| ||||| ||| |||||||||| || || || | ||||| Sbjct 194944 TGTGGAAATCATCGCAAATGACCAAGGCAACCGAACTACTCCGTCATACGTCGCGTTCAC 194885 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | || |||| |||||||| ||| | || | | | || || | ||| Sbjct 194884 AGATACAGAGCGGTTGATTGGAGATGCAGCTAAAAACCAGGTCGCCCTCAACCCCAACAA 194825 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | |||||||| ||||| | || || | | ||| | || ||| | || Sbjct 194824 CACAGTATTTGATGCCAAACGACTCATCGGCCGCAAGTTTGACGACCCGAAGATCCAACA 194765 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 || ||| |||||||||| ||| || || | |||| | ||| ||||| | || ||| Sbjct 194764 GGACATGCAGCATTGGCCCTTCAAAGTTATAAATGACTGTGGCAAACCCAAGATACAAGT 194705 Query 550291 TACTCATGAAGGATCTGTTAAACAA-----TTTTCACCAGAACAAATTT-CATCTATGGT 550344 || | | |||| | |||||| || | || || |||| || | ||||| Sbjct 194704 TAA-CTTTAAGG----GAGAAACAAAGAAGTTCGCGCCGGAGGAAATCAGCAGC-ATGGT 194651 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 |||| || ||||| | || || |||| | || ||| ||||| || Sbjct 194650 GTTAACAAAGATGAAGGAGACTGCAGAGGCTTACCTCGGAACCTCAGTGCGAGATGCTGT 194591 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || || || |||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct 194590 CATCACAGTCCCAGCATACTTCAACGACTCACAACGACAAGCCACTAAGGATGCAGGTGC 194531 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 || ||||| ||||| || || | || |||||||| ||||| ||||| || || || || Sbjct 194530 CATCGCTGGGCTTAACGTGCTAAGGATCATCAATGAGCCTACAGCTGCCGCCCTCGCCTA 194471 Query 550525 TGGACTTGATAAACATAATGATCAA----GAACTTAATGTACTCATCTTTGATTGTGGAG 550580 || || || ||| || |||| |||| ||||| || || |||||| ||| | Sbjct 194470 CGGTCTCGACAAAAAT----CTCAAAGGCGAACGAAATGTGCTAATATTTGATCTTGGTG 194415 Query 550581 G 550581 | Sbjct 194414 G 194414 >seq446 Length=1585405 Score = 168 bits (186), Expect = 5e-36 Identities = 401/601 (67%), Gaps = 20/601 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||| | ||||| || || |||||||| || ||||| | || || Sbjct 26735 AGCTATTGGAATTGATCTTGGAACAACCTACTCGTGTGTTGGAGTGTGGCAGCACGGGAA 26676 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| || || ||||| ||||| ||| |||||||||| || || || | ||||| Sbjct 26675 TGTGGAAATCATCGCAAATGACCAAGGCAACCGAACTACTCCGTCATACGTCGCGTTCAC 26616 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | || |||| |||||||| ||| | || | | | || || | ||| Sbjct 26615 AGATACAGAGCGGTTGATTGGAGATGCAGCTAAAAACCAGGTCGCCCTCAACCCCAACAA 26556 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | |||||||| ||||| | || || | | ||| | || ||| | || Sbjct 26555 CACAGTATTTGATGCCAAACGACTCATCGGCCGCAAGTTTGACGACCCGAAGATCCAACA 26496 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 || ||| |||||||||| ||| || || | |||| | ||| ||||| | || ||| Sbjct 26495 GGACATGCAGCATTGGCCCTTCAAAGTTATAAATGACTGTGGCAAACCCAAGATACAAGT 26436 Query 550291 TACTCATGAAGGATCTGTTAAACAA-----TTTTCACCAGAACAAATTT-CATCTATGGT 550344 || | | |||| | |||||| || | || || |||| || | ||||| Sbjct 26435 TAA-CTTTAAGG----GAGAAACAAAGAAGTTCGCGCCGGAGGAAATCAGCAGC-ATGGT 26382 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 |||| || ||||| | || || |||| | || ||| ||||| || Sbjct 26381 GTTAACAAAGATGAAGGAGACTGCAGAGGCTTACCTCGGAACCTCAGTGCGAGATGCTGT 26322 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || || || |||||||| || || ||||||||||| ||||| ||||| ||||| || Sbjct 26321 CATCACAGTCCCAGCATACTTCAACGACTCACAACGACAAGCCACTAAGGATGCAGGTGC 26262 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 || ||||| ||||| || || | || |||||||| ||||| ||||| || || || || Sbjct 26261 CATCGCTGGGCTTAACGTGCTAAGGATCATCAATGAGCCTACAGCTGCCGCCCTCGCCTA 26202 Query 550525 TGGACTTGATAAACATAATGATCAA----GAACTTAATGTACTCATCTTTGATTGTGGAG 550580 || || || ||| || |||| |||| ||||| || || |||||| ||| | Sbjct 26201 CGGTCTCGACAAAAAT----CTCAAAGGCGAACGAAATGTGCTAATATTTGATCTTGGTG 26146 Query 550581 G 550581 | Sbjct 26145 G 26145 >seq1732 Length=1186882 Score = 125 bits (138), Expect = 6e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| |||||||| || || |||||| || ||||| |||| ||||| | | Sbjct 785225 AGACGGAGCACAAGATGTAGTGTGGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGT 785166 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | || || || ||||| ||||| | ||||| || |||||||| |||||| Sbjct 785165 CCATCTTCCAACTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGAGGAATGCCTTCT 785106 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| || || ||||| |||||||| |||| | | ||||||||| Sbjct 785105 TTGTCTTGGATCTTGGCCTTTACATTTTCAATTGTGTCAGAAGGTTCAACTTCGAGAGTG 785046 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| ||||||||||| || || || || |||||| Sbjct 785045 ATGGTTTTGCCAGTAAGAGTCTTGACAAATATCTGCATA 785007 Score = 123 bits (136), Expect = 2e-22 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || |||||||| ||||| |||||| ||| ||||| |||| || || | Sbjct 784770 GAGACGCAGAACAAGATGGAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAGTGTGCG 784711 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| | || ||||| || || || | || ||||||||| |||||||| ||||| Sbjct 784710 GCCGTCTTCCAACTGCTTTCCTGCGAAGATCAATCGTTGCTGATCTGGAGGAATGCCTTC 784651 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAG 563434 ||||||||||||||| ||| || ||||| || || | || || ||| || | Sbjct 784650 TTTATCTTGAATTTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCGAC-TTCAAGCG 784592 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||| || | ||||| |||||||| ||||| Sbjct 784591 TAATAGTTTTACCCGTCAAGGTTTTTACGAAAATCTGCAT 784552 Score = 116 bits (128), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| |||||||| ||||| |||||| ||||||||| |||| ||||| | | Sbjct 785680 AGACGGAGCACAAGATGGAGGGTGGATTCTTTTTGAATATTGTAGTCAGAAAGAGTGCGT 785621 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| | |||||||||||||| || || | ||||| ||||| || || ||||| Sbjct 785620 CCGTCTTCTAACTGTTTTCCGGCAAAGATGAGACGCTGCTGGTCAGG-GGGATGCCTTCC 785562 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || || || || ||| || |||||| ||||| | | | || |||||| Sbjct 785561 TTGTCCTGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGCTCAACCTCCAGAGTA 785502 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||| || ||||| | || || |||||||| |||||| Sbjct 785501 ATAGTCTTGCCAGTCAAGGTCTTTACGAAAATCTGCATA 785463 Score = 107 bits (118), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||||||||| || |||||| || ||||| |||| ||||| | | Sbjct 786814 AGACGGAGCACAAGATGAAGTGTGGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGT 786755 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| | |||||||||||||| || || | ||||| ||||| || || ||||| Sbjct 786754 CCGTCTTCCAACTGTTTTCCGGCAAAGATGAGACGCTGCTGGTCAGG-GGGATGCCTTCC 786696 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || || || || ||| || |||||| ||||| | | | || |||||| Sbjct 786695 TTGTCCTGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGTTCAACCTCCAGAGTA 786636 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||| || ||||| | || || |||||||| |||||| Sbjct 786635 ATAGTCTTGCCAGTCAAGGTCTTTACGAAAATCTGCATA 786597 Score = 105 bits (116), Expect = 5e-17 Identities = 159/221 (72%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| |||||||||||||| |||||| ||||||||| || | | ||| | Sbjct 787269 AGACGGAGCACAAGATGAAGGGTGGATTCTTTTTGAATATTGTAGTCGGACAAAGTGCGA 787210 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || | |||||| || ||||| ||||| | ||||| || || || || || || Sbjct 787209 CCATCCTCTAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGG-GGGATACCCTCC 787151 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAG 563434 |||||||| || || ||| || ||||| || |||| || || || || |||| Sbjct 787150 TTATCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCAG-ATG-GTTCAACCTCCAGAG 787093 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || ||||||||||| || ||||| || |||||| Sbjct 787092 TGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCATA 787052 Score = 95.1 bits (104), Expect = 1e-13 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| |||||||||||||| |||||| || || ||||| | | || | Sbjct 786360 AGACGGAGCACAAGATGAAGGGTTGATTCTTTCTGGATGTTATAATCTGACAATGTGCGG 786301 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || || || ||||| || | ||||| || || || || ||||| Sbjct 786300 CCATCTTCCAGCTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCTGG-GGGATGCCTTCC 786242 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 |||||||| || || |||||| ||||| || |||| | | || ||||| Sbjct 786241 TTATCTTGGATCTTAGCTTTTACATTTTCAATGGTGTCAGACGGCTCAACCTCCAGAGTG 786182 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || |||||||| || ||||||||||| |||||| Sbjct 786181 ATGGTCTT-CCAGTAAGGGTCTTAACGAAAATCTGCATA 786144 Score = 93.3 bits (102), Expect = 3e-13 Identities = 155/221 (70%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| |||||||| ||||| ||| | | ||| || || ||||| | | || | Sbjct 786587 AGACGGAGCACAAGATGGAGGGTTGACTCTTTCTGG--ATGTTATAATCTGACAATGTGC 786530 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||| || || || || || ||||| || | ||||| || || ||| | |||| Sbjct 786529 GGCCATCTTCCAGCTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCTGGGGGA-TGCCTT 786471 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAG 563434 | |||||||| || || |||||| ||||| || |||| | | || |||| Sbjct 786470 CCTTATCTTGGATCTTAGCTTTTACATTTTCAATGGTGTCAGACGGCTCAACCTCCAGAG 786411 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || |||||||| || ||||||||||| |||||| Sbjct 786410 TGATGGTCTTGCCAGTAAGGGTCTTAACGAAAATCTGCATA 786370 >seq1645 Length=457589 Score = 109 bits (120), Expect = 4e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||||| || ||| |||||||||| ||| |||||| ||||||| | | || | Sbjct 14116 TTTTCTCCGGAAGAAATTTCATCCATGATTTTAAGTAAAATGAGAGACGTTGCTGAAACA 14175 Query 550376 TTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435 | | | ||| |||| |||||| || | ||||| || || ||||| |||||||| Sbjct 14176 TATTTGGGTGGGACGGTTAAGGATGCTGTTGTCACTGTGCCGGCTTATTTCAATGACTCC 14235 Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 || | || || || || ||| |||| || ||||| ||||||||||| | || || Sbjct 14236 CAGAGACAGGCCACCAAGGATTCTGGTGTAATAGCTGGTCTTAATGTTCTCAGAATCATT 14295 Query 550496 AATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACAT 550540 ||||||||||| || || || ||||| || || ||||| ||| || Sbjct 14296 AATGAACCTACGGCCGCCGCTCTTGCCTACGGTCTTGACAAAAAT 14340 Score = 86.0 bits (94), Expect = 5e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 |||| |||| |||||||||||| | | || | ||| |||||| |||||| ||||||| Sbjct 15333 TTCAGATTTACGAAGGAGAAAGAGCAATGACAAGAGACAATAATTTACTTGGCACTTTTA 15392 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 | |||| || || || || ||||| | ||||| || ||||||||||| | ||| Sbjct 15393 ACTTAGCCGGCATACCACCCGCTCCAAGAGGAGTGCCTCAAATTGAAGTGAGTTT 15447 >seq535 Length=1858795 Score = 104 bits (114), Expect = 2e-16 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| || || || ||||| || || |||| |||||| ||||| || ||||| ||||| Sbjct 57496 ATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTT 57555 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAAC 563438 ||||| ||||| ||| || |||||||| |||| | | | ||| || || | Sbjct 57556 GTCTTGGATTTTAGCTTTGACGTTTTCAATTGTGTCAGAGGGCTCAACTTCCAGTGTGAT 57615 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||||||||||| | ||||| || || ||||||||| Sbjct 57616 AGTTTTACCAGTCAAGGTTTTGACAAAGATTTGCATA 57652 Score = 104 bits (114), Expect = 2e-16 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| || || || ||||| || || |||| |||||| ||||| || ||||| ||||| Sbjct 1713492 ATCTTCCAGCTGCTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTT 1713433 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAAC 563438 ||||| ||||| ||| || |||||||| |||| | | | ||| || || | Sbjct 1713432 GTCTTGGATTTTAGCTTTGACGTTTTCAATTGTGTCAGAGGGCTCAACTTCCAGTGTGAT 1713373 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||||||||||| | ||||| || || ||||||||| Sbjct 1713372 AGTTTTACCAGTCAAGGTTTTGACAAAGATTTGCATA 1713336 Score = 86.0 bits (94), Expect = 5e-11 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 ||| || ||| |||||| |||||| || || | || || | |||||| ||||| Sbjct 56768 ATGCAGTGTAGATTCTTTTTGAATATTATAGTCGGAAAGTGTGCGGCCATCTTCCAGTTG 56827 Query 563331 TTTT-CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTT 563389 || || || || || | |||||| || ||||| |||||||| ||||| |||||||||| Sbjct 56828 CTTGGCCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATTCCCTCTTTGTCTTGAATTT 56887 Query 563390 TTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAG 563449 || |||||| || || || || | | | ||| | ||| | ||||| |||| Sbjct 56888 TTGCTTTTACATTTTCGATGGTGTCTGATGGCTCAACTTCTAAAGTTATTGTTTT-CCAG 56946 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||||| || || ||||||||| Sbjct 56947 TCAAGGTTTTGACAAAGATTTGCATA 56972 Score = 86.0 bits (94), Expect = 5e-11 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 ||| || ||| |||||| |||||| || || | || || | |||||| ||||| Sbjct 1714220 ATGCAGTGTAGATTCTTTTTGAATATTATAGTCGGAAAGTGTGCGGCCATCTTCCAGTTG 1714161 Query 563331 TTTT-CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTT 563389 || || || || || | |||||| || ||||| |||||||| ||||| |||||||||| Sbjct 1714160 CTTGGCCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATTCCCTCTTTGTCTTGAATTT 1714101 Query 563390 TTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAG 563449 || |||||| || || || || | | | ||| | ||| | ||||| |||| Sbjct 1714100 TTGCTTTTACATTTTCGATGGTGTCTGATGGCTCAACTTCTAAAGTTATTGTTTT-CCAG 1714042 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||||| || || ||||||||| Sbjct 1714041 TCAAGGTTTTGACAAAGATTTGCATA 1714016 >seq1835 Length=830947 Score = 95.1 bits (104), Expect = 1e-13 Identities = 244/368 (66%), Gaps = 9/368 (2%) Strand=Plus/Plus Query 685275 CCTGTAttttttttAAGATCGAGGAAAAAATAAATATCTGCATGCCAAGGTTCAATATAA 685334 || ||||||||||| | ||| | ||| | || || |||||||| ||||| | |||| Sbjct 533919 CCAGTATTTTTTTTCAAATCTAAGAATTCGAATATGTCAGCATGCCATGGTTCTAAATAA 533978 Query 685335 ATAGCAAATGAACCAG--CTCTT-TTGCCTCCTTGATTGGCATACCTCGATATATTATTA 685391 |||||||| | ||||| ||||| || || ||||| | |||| | | | ||||||| Sbjct 533979 ATAGCAAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACATAGCGAGCTGTATTATTG 534038 Query 685392 AATACAGTTAATACTCG---TAGACCACTTGCTGTGCCTTGTGTAGAATTAATATAAGAT 685448 | || |||| | | | |||||| ||| | ||| | |||| | ||| |||| Sbjct 534039 TAGACTCTTAACATTGGAACAAGACCATTTGATACGCCATTTGTACCAGCAATGTAAGTA 534098 Query 685449 CCATCCGCCCTAATATTTGAAACATTTACACCAATTCCACCAGCATATTTACTAATCATA 685508 || | | |||||| |||| | ||||| || ||||| ||||| ||| | | Sbjct 534099 CCCTTAGATCTAATACAGTGGACATGAAGTCCAATCCCTCCAGCTGATTTAGAAATGAGA 534158 Query 685509 GCACAATCTTTCCAACAATCACCAATTGCTCCCA---TATCATCTTTTATTCCTAAAAGG 685565 ||||| | ||| |||| ||| || | | | |||||||| ||| | | ||| Sbjct 534159 GCACATTGTTTTAGGGTATCATAAATCCCTTCAATGCTGTCATCTTTCATTGCAATGAGG 534218 Query 685566 AAACAGCTTGATAATTGTTCATGAGTAGTTCCAGCATTAAATAATGTTGGTGTTGCATGA 685625 ||||| |||||||| | ||| ||| |||| |||| ||||| ||||||| Sbjct 534219 AAACAAGAAGATAATTGAGGACGAGGTGTTGCAGCTGAGAATAGAGTTGGGCTTGCATGT 534278 Query 685626 GTAAAATA 685633 || ||||| Sbjct 534279 GTGAAATA 534286 >seq1057 Length=1009321 Score = 95.1 bits (104), Expect = 1e-13 Identities = 244/368 (66%), Gaps = 9/368 (2%) Strand=Plus/Minus Query 685275 CCTGTAttttttttAAGATCGAGGAAAAAATAAATATCTGCATGCCAAGGTTCAATATAA 685334 || ||||||||||| | ||| | ||| | || || |||||||| ||||| | |||| Sbjct 686736 CCAGTATTTTTTTTCAAATCTAAGAATTCGAATATGTCAGCATGCCATGGTTCTAAATAA 686677 Query 685335 ATAGCAAATGAACCAG--CTCTT-TTGCCTCCTTGATTGGCATACCTCGATATATTATTA 685391 |||||||| | ||||| ||||| || || ||||| | |||| | | | ||||||| Sbjct 686676 ATAGCAAAAGCACCAGGTCTCTTGTTACCACCTTGGTCAACATAGCGAGCTGTATTATTG 686617 Query 685392 AATACAGTTAATACTCG---TAGACCACTTGCTGTGCCTTGTGTAGAATTAATATAAGAT 685448 | || |||| | | | |||||| ||| | ||| | |||| | ||| |||| Sbjct 686616 TAGACTCTTAACATTGGAACAAGACCATTTGATACGCCATTTGTACCAGCAATGTAAGTA 686557 Query 685449 CCATCCGCCCTAATATTTGAAACATTTACACCAATTCCACCAGCATATTTACTAATCATA 685508 || | | |||||| |||| | ||||| || ||||| ||||| ||| | | Sbjct 686556 CCCTTAGATCTAATACAGTGGACATGAAGTCCAATCCCTCCAGCTGATTTAGAAATGAGA 686497 Query 685509 GCACAATCTTTCCAACAATCACCAATTGCTCCCA---TATCATCTTTTATTCCTAAAAGG 685565 ||||| | ||| |||| ||| || | | | |||||||| ||| | | ||| Sbjct 686496 GCACATTGTTTTAGGGTATCATAAATCCCTTCAATGCTGTCATCTTTCATTGCAATGAGG 686437 Query 685566 AAACAGCTTGATAATTGTTCATGAGTAGTTCCAGCATTAAATAATGTTGGTGTTGCATGA 685625 ||||| |||||||| | ||| ||| |||| |||| ||||| ||||||| Sbjct 686436 AAACAAGAAGATAATTGAGGACGAGGTGTTGCAGCTGAGAATAGAGTTGGGCTTGCATGT 686377 Query 685626 GTAAAATA 685633 || ||||| Sbjct 686376 GTGAAATA 686369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029169288714040