Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30]
2,396 sequences; 514,225,903 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1772 123 3e-23
>seq1772
Length=243193
Score = 123 bits (136), Expect = 3e-23
Identities = 139/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505
||||| || ||||| || | | ||||| |||||||| | ||| || || ||||||||
Sbjct 41281 ATATATGTGTCAATAAGAAGAGAGTACATCTCAGAGTGTACATTCTCCATGGCTATCTGG 41222
Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565
|||||||| || || |||||||||| | |||||| || | | | || | | | | | |
Sbjct 41221 AAACCATAGAAGCATCTAGCTTCAGTCACTTGAACTTCTTGAGAGAAACGTTCAACCAGG 41162
Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625
|||||||| || |||||||| ||| ||||||||||| || |||| || ||||| ||
Sbjct 41161 TTTTCATTGACAATCCCATCGGAAGCAGCAAAGAAAGCCAGCACATGCTTGATAAAGTGC 41102
Query 37626 CTTTCA 37631
|| |||
Sbjct 41101 CTCTCA 41096
Score = 100 bits (110), Expect = 3e-16
Identities = 98/125 (78%), Gaps = 1/125 (1%)
Strand=Plus/Minus
Query 37194 AAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtt 37253
|||||| |||||||| ||||| ||||||| || ||||| || ||||||||||| | |
Sbjct 41689 AAACCT-CATCTCTAGATATCAGTTCATTACTGAATGTTAAACCAGGCATTAAACCACGT 41631
Query 37254 tttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCA 37313
||||| ||||| || || | ||||| || || |||||||| ||||| ||||| |||
Sbjct 41630 TTTTTCATCCAGAAAATGGAGGCAAAGCTGCCTGAGAAGAAAATTCCTTCGACTGCAGCA 41571
Query 37314 AATGC 37318
|||||
Sbjct 41570 AATGC 41566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592299060111840
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |