Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1772 125 1e-23 >seq1772 Length=243193 Score = 125 bits (138), Expect = 1e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||||||||| |||||||| || || |||||||| || |||||| || || || Sbjct 41258 GTACATCTCAGAGTGTACATTCTCCATGGCTATCTGGAAACCATAGAAGCATCTAGCTTC 41199 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | ||| || |||||| ||||| | || | ||| || |||||||| |||||||| || Sbjct 41198 AGTCACTTGAACTTCTTGAGAGAAACGTTCAACCAGGTTTTCATTGACAATCCCATCGGA 41139 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTT 48570 |||||||||||| || || ||||| || Sbjct 41138 AGCAGCAAAGAAAGCCAGCACATGCTT 41112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931504900592640