Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq646 87.8 2e-12 >seq646 Length=504970 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/157 (74%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGG 193498 ||||| ||| |||| ||||| || ||| ||| | |||| | |||||||||||||||| Sbjct 71865 CGTATTCCTCAAATCGGGGACAAGTTTGCTTCTCGTCATGGAC-AAAAAGGAACTTGTGG 71807 Query 193499 TATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTAT 193558 || || ||||||||||||||||||||| | ||||| || |||||||| Sbjct 71806 AATTCAGTACAGACAAGAAGATATGCCATTTACTTGTGAGGGTAT-AACCCCGATATTAT 71748 Query 193559 TATTAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||||||||| | ||| ||||| | ||||| ||| Sbjct 71747 TATTAATCCACACGCTATCCCATCTCGTATGACAATT 71711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635158576430880