Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq646 84.2 3e-11 >seq646 Length=504970 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/157 (73%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 192993 CGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGG 193051 ||||| ||| |||| ||||| || ||| ||| | |||| | |||||||||||||||| Sbjct 71865 CGTATTCCTCAAATCGGGGACAAGTTTGCTTCTCGTCATGGAC-AAAAAGGAACTTGTGG 71807 Query 193052 TATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTAT 193111 || || ||||||||||||||||||||| | ||||| || |||||||| Sbjct 71806 AATTCAGTACAGACAAGAAGATATGCCATTTACTTGTGAGGGTAT-AACCCCGATATTAT 71748 Query 193112 TATTAATCCAAATTGTATTCCGTCCAGAATGACCATT 193148 |||||||||| | ||| || || | ||||| ||| Sbjct 71747 TATTAATCCACACGCTATCCCATCTCGTATGACAATT 71711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628512375490560