Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq713 102 7e-17 >seq713 Length=456993 Score = 102 bits (112), Expect = 7e-17 Identities = 166/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 99851 ATGTCCGGCCCCGTGCACCCTAAATACGGCACTAAATCTGCACGTTTAGAAACTTTTGTG 99910 ||| |||| ||||||||||| ||| | || || | ||||| || | |||| Sbjct 320686 ATGGCCGGTCCCGTGCACCCACGATATGCATCTGAAGCCGCACGACTACGCAGTTTTAAA 320627 Query 99911 GATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTAC 99970 || ||||| | | || ||||||||| || || | ||||| || || |||| |||| Sbjct 320626 GACTGGCCACGATGCATGCGACAAAAACCTGAAGAACTCGCCGAGGCTGGCTTTT-TTAC 320568 Query 99971 ACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAA 100030 || || | || |||||| || |||||| ||||||| || || | ||||| ||||| Sbjct 320567 ACTGGTCAGGGAGACAAAACCAAGTGTTTTTATTGCGATGGTGGATTAAAAGATTGGGAG 320508 Query 100031 AGCACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGC 100088 | | |||| || ||| | |||||||| | |||||||| || ||| | ||||||| Sbjct 320507 AACCATGACGTACCCTGGGAACAACACGCAAGGTGGTTTGACCGTTGCGCCTACGTGC 320450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402317851472768