Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1772 100 2e-16 >seq1772 Length=243193 Score = 100 bits (110), Expect = 2e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 |||| || |||||||| ||| ||||| ||||||||||| ||||| || || | | Sbjct 41122 TGGCTTTCTTTGCTGCTTCCGATGGGATTGTCAATGAAAACCTGGTTGAACGTTTCTCTC 41181 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 ||||||||||| | | ||||| |||| || ||||| || || || ||||| || ||| Sbjct 41182 AAGAAGTTCAAGTGACTGAAGCTAGATGCTTCTATGGTTTCCAGATAGCCATGGAGAATG 41241 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 | || || || |||||| |||||| || || || || || Sbjct 41242 TACACTCTGAGATGTACTCTCTTCTTATTGACACATATAT 41281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397444393787980