Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq890 111 1e-19 >seq890 Length=2258411 Score = 111 bits (122), Expect = 1e-19 Identities = 152/211 (72%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 111771 CTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAA 111830 |||||| || ||||| ||||||||||||| ||||||| | ||| || ||||| || || Sbjct 27676 CTCCAATCCTGTGATATGTGCAATCATGTGAGTGAGTAAAGAGTAGCTGGCAATATTGAA 27617 Query 111831 TGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTG 111890 || || || || ||||||||| | ||||| || ||| | || |||| |||| | Sbjct 27616 AGGAACTCCCAGACCCATATCTGCGCTCCTTTGGTACAGCAGGCAAGATAATTTACCATC 27557 Query 111891 TGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATCCCATTCA----TAA 111946 ||| |||| || ||| ||| |||||| |||||||| ||||| | ||| | | Sbjct 27556 TGATACATGGAACTGAGCAAGACAATGACATGGAGGCAAAGCCATTTTACTCAGATCTGA 27497 Query 111947 AGGGTCCCCATGCACACATGATCATCCTTCT 111977 |||| ||||||||| || | ||| ||||| Sbjct 27496 TGGGT-TCCATGCACATATCAGCATTCTTCT 27467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391934154698548