Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq890 86.0 5e-12 >seq890 Length=2258411 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 118537 CCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACA 118596 ||||| | || |||||||||| || | ||| ||||||||| | ||| |||||||| Sbjct 27669 CCTGTGATATGTGCAATCATGTGAGTGAGTAAAGAGTAGCTGGCAATATTGAAAGGAACT 27610 Query 118597 CCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACA 118656 ||||||||||| ||||| || ||||||| ||||||| | | || | || ||| Sbjct 27609 CCCAGACCCATATCTGCGCTCCTTTGGTACAGCAGGCAAGATAATTTACCATCTGATACA 27550 Query 118657 TAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGATTC 118716 | |||||| | ||||||||||||| | |||| |||||| | | || ||| Sbjct 27549 TGGAACTGAGCAAGACAATGACATGGAGGCAAAGCCATTTTACTCAGATCTGATGGGTTC 27490 Query 118717 CAGGC 118721 || || Sbjct 27489 CATGC 27485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414464696759344