Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30]
2,396 sequences; 514,225,903 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1046 188 2e-42
seq1732 185 2e-41
seq535 154 3e-32
seq2070 109 1e-18
>seq1046
Length=465179
Score = 188 bits (208), Expect = 2e-42
Identities = 173/219 (79%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959
|| || || | ||| || ||||| || ||||||||||| ||||| | || || | |||
Sbjct 190228 CTGAGCACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAGAGAGTACGGCCA 190169
Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019
||||||| ||| || || ||||||||||| ||||| ||||| || || | ||| || |||
Sbjct 190168 TCTTCCAACTGTTTACCAGCGAAGATAAGACGTTGCTGGTCTGGTGGGATTCCCTCTTTG 190109
Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079
|||||||||||| ||||| |||||||||||||| ||| ||| |||||||| |||||
Sbjct 190108 TCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCTGAGGCTTCCACCTCGAGGGTGATG 190049
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
|| || |||||||| || ||||| || | ||||||| ||
Sbjct 190048 GTTTTACCCGTGAGGGTTTTTACGAAGATCTGCATTGTA 190010
>seq1732
Length=1186882
Score = 185 bits (204), Expect = 2e-41
Identities = 168/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || ||||| ||||| |||||||| || || | ||| || | |||||||
Sbjct 785219 AGCACAAGATGTAGTGTGGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCT 785160
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| || |||||||| || || ||||| ||||||| ||||| |||||
Sbjct 785159 TCCAACTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGAGGAATGCCTTCTTTGTCT 785100
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || ||||| || |||||||| |||||| ||||||||||| ||
Sbjct 785099 TGGATCTTGGCCTTTACATTTTCAATTGTGTCAGAAGGTTCAACTTCGAGAGTGATGGTT 785040
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| ||||| | ||||||
Sbjct 785039 TTGCCAGTAAGAGTCTTGACAAATATCTGCAT 785008
Score = 167 bits (184), Expect = 5e-36
Identities = 165/212 (78%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || ||||| ||||| |||||||| || |||| ||| || | |||||||
Sbjct 785901 AGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGTCCATCT 785842
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| |||||||| || || || |||||||| || | ||||||||||||
Sbjct 785841 TCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGG-GGGATACCTTCCTTGTCC 785783
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| || || || || || || || |||||||| ||||| || |||
Sbjct 785782 TGGATCTTGGCTTTGACATTCTCAATAGTATCCGAAGGCTCAACCTCCAGAGTAATAGTC 785723
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | |||||||| || | ||||||
Sbjct 785722 TTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 785691
Score = 167 bits (184), Expect = 5e-36
Identities = 165/212 (78%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || || |||||||| |||||||||||||| | | || | ||||||
Sbjct 786581 AGCACAAGATGGAGGGTTGACTCTTTCTGGATGTTATAATCTGACAATGTGCGGCCATCT 786522
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| ||||| || || || || ||||| || || | |||||||| ||
Sbjct 786521 TCCAGCTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCTGG-GGGATGCCTTCCTTATCT 786463
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| || ||||| ||||||||||| |||||||| |||||||| |||
Sbjct 786462 TGGATCTTAGCTTTTACATTTTCAATGGTGTCAGACGGCTCAACCTCCAGAGTGATGGTC 786403
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 786402 TTGCCAGTAAGGGTCTTAACGAAAATCTGCAT 786371
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | ||| | ||| || ||||| |||||||| || || || || | ||| ||
Sbjct 787501 ACGAAGACGCAAGACCAAGTGCAGGGTGGATTCTTTTTGAATATTGTAGTCGGAAAGAGT 787442
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||| ||||||| ||||||||| ||||||||||| || || |||||||| || | ||
Sbjct 787441 GCGTCCGTCTTCCAACTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGGGGGATGCC 787382
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| ||| ||||| || || || || || |||||||| ||
Sbjct 787381 TTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGCTCAACCTCCAG 787322
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || ||||| || || | |||||||| || | ||||||
Sbjct 787321 AGTAATAGTCTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 787280
Score = 163 bits (180), Expect = 7e-35
Identities = 165/212 (78%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| ||||| || || ||||| |||||||||||||| | | || | ||||||
Sbjct 786354 AGCACAAGATGAAGGGTTGATTCTTTCTGGATGTTATAATCTGACAATGTGCGGCCATCT 786295
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| ||||| || || || || ||||| || || | |||||||| ||
Sbjct 786294 TCCAGCTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCTGG-GGGATGCCTTCCTTATCT 786236
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| || ||||| ||||||||||| |||||||| |||||||| |||
Sbjct 786235 TGGATCTTAGCTTTTACATTTTCAATGGTGTCAGACGGCTCAACCTCCAGAGTGATGGTC 786176
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| || || ||||| || || | ||||||
Sbjct 786175 -TTCCAGTAAGGGTCTTAACGAAAATCTGCAT 786145
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || || ||||| |||||||| || || | | || | ||||||
Sbjct 787036 AGCACCAAGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCT 786977
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| ||||||||||| || || |||||||| || | ||||||||||||
Sbjct 786976 TCCAACTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 786917
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| ||||| || |||||||| ||||||||| |||||||| ||
Sbjct 786916 TGGATCTTGGCCTTCACATTTTCAATCGTGTCAGAAGGTTCAACCTCAAGAGTGATGGTT 786857
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||| || || || | ||||||
Sbjct 786856 TTGCCAGTCAAAGTTTTGACGAAGATCTGCAT 786825
Score = 158 bits (174), Expect = 3e-33
Identities = 163/212 (77%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || || |||||||| |||||||| || || | ||| || | ||| |||
Sbjct 786128 AGCACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCGTCT 786069
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||| |||||||| ||||| || || || || |||||||| ||| ||||||||||||
Sbjct 786068 TCCAGTTGCTTGCCAGCGAAAATTAGACGCTGCTGGTCAGGGGGATG-CCTTCCTTGTCC 786010
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| ||||| || || || || || |||||||| ||||| || |||
Sbjct 786009 TGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGCTCAACCTCCAGAGTAATAGTC 785950
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | |||||||| || | ||||||
Sbjct 785949 TTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 785918
Score = 158 bits (174), Expect = 3e-33
Identities = 163/212 (77%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| ||||| ||||| ||||| |||||||| || || | ||| || | ||| |||
Sbjct 786808 AGCACAAGATGAAGTGTGGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCGTCT 786749
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||| || || || ||||| || || || |||||||| ||| ||||||||||||
Sbjct 786748 TCCAACTGTTTTCCGGCAAAGATGAGACGCTGCTGGTCAGGGGGATG-CCTTCCTTGTCC 786690
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| ||||| || || || || || ||||||||| ||||| || |||
Sbjct 786689 TGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGTTCAACCTCCAGAGTAATAGTC 786630
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | |||||||| || | ||||||
Sbjct 786629 TTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 786598
Score = 154 bits (170), Expect = 3e-32
Identities = 162/212 (76%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| ||||| ||||| |||||||| || || || || | | || | |||||
Sbjct 787263 AGCACAAGATGAAGGGTGGATTCTTTTTGAATATTGTAGTCGGACAAAGTGCGACCATCC 787204
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| | || ||||| || |||||||| || || ||||| || ||| ||| |||| ||
Sbjct 787203 TCTAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGATACCCT-CCTTATCT 787145
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| |||||||| ||||||||||| ||||||||| |||||||| |||
Sbjct 787144 TGGATCTTGGCTTTGACGTTTTCAATGGTGTCAGATGGTTCAACCTCCAGAGTGATGGTC 787085
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || |||||||| || || | ||||||
Sbjct 787084 TTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 787053
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || || || ||||| |||||||||||||| | | || | ||||||
Sbjct 785447 AGCACAAGATGGAGGGTTGATTCTTTCTGGATGTTATAATCTGACAAAGTTCGGCCATCT 785388
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| || ||||| || |||||||| || || |||||||| || | || || ||||||
Sbjct 785387 TCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATACCCTCTTTGTCC 785328
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || || || ||||| || |||||||| |||||||||||||||||| |||
Sbjct 785327 TGAATTTTGGCCTTTACATTTTCAATTGTGTCAGAAGGTTCAACCTCGAGAGTGATGGTC 785268
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||| || ||||| | ||||||
Sbjct 785267 TTACCAGTCAAAGTTTTGACAAATATCTGCAT 785236
Score = 140 bits (154), Expect = 8e-28
Identities = 159/212 (75%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || ||||| |||||||| || || || || | ||| || | ||| |||
Sbjct 785674 AGCACAAGATGGAGGGTGGATTCTTTTTGAATATTGTAGTCAGAAAGAGTGCGTCCGTCT 785615
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| | ||| || || || ||||| || || || |||||||| ||| ||||||||||||
Sbjct 785614 TCTAACTGTTTTCCGGCAAAGATGAGACGCTGCTGGTCAGGGGGATG-CCTTCCTTGTCC 785556
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| ||||| || || || || || |||||||| ||||| || |||
Sbjct 785555 TGGATCTTGGCTTTGACGTTCTCAATAGTATCCGAAGGCTCAACCTCCAGAGTAATAGTC 785496
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | |||||||| || | ||||||
Sbjct 785495 TTGCCAGTCAAGGTCTTTACGAAAATCTGCAT 785464
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || ||||| |||||||| ||||| || || | || || | || |||
Sbjct 784763 AGAACAAGATGGAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAGTGTGCGGCCGTCT 784704
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| ||||||||||| | ||||| || || ||||||| ||||| || ||
Sbjct 784703 TCCAACTGCTTTCCTGCGAAGATCAATCGTTGCTGATCTGGAGGAATGCCTTCTTTATCT 784644
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || ||| || ||||| |||||||| || || || || || || || ||
Sbjct 784643 TGAATTTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCGACTTCAAGCGTAATAGTT 784584
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| | || ||||| || | ||||||
Sbjct 784583 TTACCCGTCAAGGTTTTTACGAAAATCTGCAT 784552
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
||||||||||| || || ||||| || ||||||||||| | ||||| | ||||| ||
Sbjct 784988 ACAAGGTGAAGGGTCGATTCTTTCTGAATGTTATAATCTGAGAGGGTGCGACCATCCTCT 784929
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
| || || || |||||||| | || || || || || |||| || || ||||| |||
Sbjct 784928 AATTGTTTACCAGCGAAGATCAATCGCTGCTGATCTGGGGGAATACCCTCTTTGTCTTGG 784869
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
|| || || || || ||||| ||||| || ||||| || || || ||||||||
Sbjct 784868 ATTTTAGCCTTAACATTCTCGATAGTGTCTGAAGGCTCAACTTCAAGGGTAATCGTCTTA 784809
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| || || || | ||||||
Sbjct 784808 CCAGTGAGAGTTTTCACGAAAATCTGCAT 784780
>seq535
Length=1858795
Score = 154 bits (170), Expect = 3e-32
Identities = 158/204 (77%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | ||||||||||||||
Sbjct 57902 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCCAGCTG 57961
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||||| |||||||| |||| ||| || |||||||| || ||
Sbjct 57962 CTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGAATTCCCTCTTTGTCCTGAAT-TT 58020
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
| | || |||||||| ||||| || || |||||||| ||||| ||||| || ||
Sbjct 58021 TGGCTTTGAATTTTCGATTGTGTCTGA-AGGTCGACCTCGAGTGTGATGGTCTTACCGGT 58079
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | |||||
Sbjct 58080 CAGGGTCTTGACAAAGATTTGCAT 58103
Score = 154 bits (170), Expect = 3e-32
Identities = 150/192 (78%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | ||||||||||||||
Sbjct 58128 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGCTG 58187
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||||| |||||||| || | ||| || |||||||| || ||
Sbjct 58188 CTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTTGTCCTGAATTTT 58247
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || |||||||| ||||| || ||| |||||||| ||||| ||||| || ||
Sbjct 58248 GGCTTTGACATTTTCGATTGTGTCTGA-AGTTCGACCTCGAGTGTGATGGTCTTACCGGT 58306
Query 211091 GAGAGTCTTTAC 211102
|| ||||| ||
Sbjct 58307 CAGGGTCTTGAC 58318
Score = 154 bits (170), Expect = 3e-32
Identities = 150/192 (78%), Gaps = 1/192 (1%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | ||||||||||||||
Sbjct 1712860 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGCTG 1712801
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||||| |||||||| || | ||| || |||||||| || ||
Sbjct 1712800 CTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTTGTCCTGAATTTT 1712741
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || |||||||| ||||| || ||| |||||||| ||||| ||||| || ||
Sbjct 1712740 GGCTTTGACATTTTCGATTGTGTCTGA-AGTTCGACCTCGAGTGTGATGGTCTTACCGGT 1712682
Query 211091 GAGAGTCTTTAC 211102
|| ||||| ||
Sbjct 1712681 CAGGGTCTTGAC 1712670
Score = 154 bits (170), Expect = 3e-32
Identities = 158/204 (77%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | ||||||||||||||
Sbjct 1713086 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCCAGCTG 1713027
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||||| |||||||| |||| ||| || |||||||| || ||
Sbjct 1713026 CTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGAATTCCCTCTTTGTCCTGAAT-TT 1712968
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
| | || |||||||| ||||| || || |||||||| ||||| ||||| || ||
Sbjct 1712967 TGGCTTTGAATTTTCGATTGTGTCTGA-AGGTCGACCTCGAGTGTGATGGTCTTACCGGT 1712909
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | |||||
Sbjct 1712908 CAGGGTCTTGACAAAGATTTGCAT 1712885
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | ||||||||||||||
Sbjct 57448 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCCAGCTG 57507
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||||| |||||||| || | ||| || ||||| ||||| ||
Sbjct 57508 CTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTTGTCTTGGATTTT 57567
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| |||||||| || ||||||||| ||||| || || ||||| || || || ||
Sbjct 57568 AGCTTTGACGTTTTCAATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTTACCAGT 57627
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| || || ||||| | |||||
Sbjct 57628 CAAGGTTTTGACAAAGATTTGCAT 57651
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | ||||||||||||||
Sbjct 1713540 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCCAGCTG 1713481
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||||| |||||||| || | ||| || ||||| ||||| ||
Sbjct 1713480 CTTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTTGTCTTGGATTTT 1713421
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| |||||||| || ||||||||| ||||| || || ||||| || || || ||
Sbjct 1713420 AGCTTTGACGTTTTCAATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTTACCAGT 1713361
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| || || ||||| | |||||
Sbjct 1713360 CAAGGTTTTGACAAAGATTTGCAT 1713337
Score = 147 bits (162), Expect = 5e-30
Identities = 158/204 (77%), Gaps = 5/204 (2%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | |||||||||||
Sbjct 57225 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGT-- 57282
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||| | ||||||| ||| ||| || |||||||| || ||
Sbjct 57283 CTTACCGGCGAAGATCAGTCGT-GCTGGTCAGTGGGAT-TCCCTCTTTGTCCTGAATTTT 57340
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || ||||| |||||||||||| | |||||||||| ||||| ||||| |||||
Sbjct 57341 GGCTTTGACATTTTCAATGGTGTCAGAGGCT-CAACCTCGAGTGTGATGGTCTTACCCGT 57399
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
||| ||||| ||||| | |||||
Sbjct 57400 GAGGGTCTTGACAAAGATTTGCAT 57423
Score = 147 bits (162), Expect = 5e-30
Identities = 158/204 (77%), Gaps = 5/204 (2%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | || || | |||||||||||
Sbjct 1713763 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGT-- 1713706
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| || ||| | ||||||| ||| ||| || |||||||| || ||
Sbjct 1713705 CTTACCGGCGAAGATCAGTCGT-GCTGGTCAGTGGGAT-TCCCTCTTTGTCCTGAATTTT 1713648
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || ||||| |||||||||||| | |||||||||| ||||| ||||| |||||
Sbjct 1713647 GGCTTTGACATTTTCAATGGTGTCAGAGGCT-CAACCTCGAGTGTGATGGTCTTACCCGT 1713589
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
||| ||||| ||||| | |||||
Sbjct 1713588 GAGGGTCTTGACAAAGATTTGCAT 1713565
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || || || || ||||| || || | || || | |||||||||||||||
Sbjct 56998 TGCAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCCAGCTGC 57057
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| || ||||| |||||||| || | ||| || |||||||| || ||
Sbjct 57058 TTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTTGTCCTGAATTTTG 57117
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || |||||||| ||||| || ||| |||||||| ||||| ||||| || ||
Sbjct 57118 GCTTTGACATTTTCGATTGTGTCTGAAGGTTCGACCTCGAGTGTGATGGTCTTACCGGTC 57177
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | |||||
Sbjct 57178 AGGGTCTTGACAAAGATTTGCAT 57200
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || || || || ||||| || || | || || | |||||||||||||||
Sbjct 1713990 TGCAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCCAGCTGC 1713931
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| || ||||| |||||||| || | ||| || |||||||| || ||
Sbjct 1713930 TTACCGGCGAAGATCAGTCGTTGCTGGTCAGGTGGGATTCCCTCTTTGTCCTGAATTTTG 1713871
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || |||||||| ||||| || ||| |||||||| ||||| ||||| || ||
Sbjct 1713870 GCTTTGACATTTTCGATTGTGTCTGAAGGTTCGACCTCGAGTGTGATGGTCTTACCGGTC 1713811
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | |||||
Sbjct 1713810 AGGGTCTTGACAAAGATTTGCAT 1713788
Score = 136 bits (150), Expect = 9e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || |||||||| || ||||| || | ||| || | ||||||||||| |||
Sbjct 56769 TGCAGTGTAGATTCTTTTTGAATATTATAGTCGGAAAGTGTGCGGCCATCTTCCAGTTGC 56828
Query 210972 TTG-CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| ||||||||||| | | |||||||||||| |||| ||| || ||||| || || ||
Sbjct 56829 TTGGCCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATTCCCTCTTTGTCTTGAATTTT 56888
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
| ||| || |||||||||||||| || ||||| || | ||| || || ||||| ||
Sbjct 56889 TGCTTTTACATTTTCGATGGTGTCTGATGGCTCAACTTCTAAAGTTATTGT-TTTCCAGT 56947
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| || || ||||| | |||||
Sbjct 56948 CAAGGTTTTGACAAAGATTTGCAT 56971
Score = 136 bits (150), Expect = 9e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || |||||||| || ||||| || | ||| || | ||||||||||| |||
Sbjct 1714219 TGCAGTGTAGATTCTTTTTGAATATTATAGTCGGAAAGTGTGCGGCCATCTTCCAGTTGC 1714160
Query 210972 TTG-CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| ||||||||||| | | |||||||||||| |||| ||| || ||||| || || ||
Sbjct 1714159 TTGGCCTGCGAAGATCAATCTTTGTTGGTCAGGTGGAATTCCCTCTTTGTCTTGAATTTT 1714100
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
| ||| || |||||||||||||| || ||||| || | ||| || || ||||| ||
Sbjct 1714099 TGCTTTTACATTTTCGATGGTGTCTGATGGCTCAACTTCTAAAGTTATTGT-TTTCCAGT 1714041
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| || || ||||| | |||||
Sbjct 1714040 CAAGGTTTTGACAAAGATTTGCAT 1714017
>seq2070
Length=321562
Score = 109 bits (120), Expect = 1e-18
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052
|| ||||| ||||| | ||| ||||| ||||||||||| |||||| || ||||||||
Sbjct 287977 TGCTGGTCTGGAGGGATTCCCTCCTTATCCTGGATCTTGGCTTTCACATTCTCGATGGTA 288036
Query 211053 TCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112
|||||| || ||||| |||||||| ||||| |||||||| || || || || | ||||
Sbjct 288037 TCAGAGGGCTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTGACGAAAATCTGC 288096
Query 211113 ATTTT 211117
|| ||
Sbjct 288097 ATCTT 288101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159116415482540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |