Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spodoptera_20frugiperda_20[genbank_20GCA_5F002213285.1_202017-06-30] 2,396 sequences; 514,225,903 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1772 107 2e-18 >seq1772 Length=243193 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 ||||| |||||| ||||| || || || ||||| ||||| |||| ||| || || Sbjct 41290 GGGTCCCTAATATATGTGTCAATAAGAAGAGAGTACATCTCAGAGTGTACATTCTCCATG 41231 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 || ||||| || || || |||||||||||||| || ||||||||||| | | | || | | Sbjct 41230 GCTATCTGGAAACCATAGAAGCATCTAGCTTCAGTCACTTGAACTTCTTGAGAGAAACGT 41171 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 || || | |||||| || || || || || || ||||| || |||| ||||| Sbjct 41170 TCAACCAGGTTTTCATTGACAATCCCATCGGAAGCAGCAAAGAAAGCCAGCACATGCTTG 41111 Query 4989 ATAAAGT 4995 ||||||| Sbjct 41110 ATAAAGT 41104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427037129617868