Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq96803 194 2e-44 seq67252 118 1e-21 seq77187 104 2e-17 >seq96803 Length=7468 Score = 194 bits (214), Expect = 2e-44 Identities = 489/735 (67%), Gaps = 15/735 (2%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| || || | ||| |||||||||||||| ||| |||| || || | || || | || Sbjct 4141 TTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGAAATTTGCT 4082 Query 16734 CCATGAAATCAAAAGGATTAGTAG-CTGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 |||| ||||||||||| || | |||||| |||||| | | | | ||| || Sbjct 4081 CCATAAAATCAAAAGGGTTTTCCGACTGAAA-TATTTTTGGACAATCTAATTCCATGAGA 4023 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 | | |||| || || |||| || || || ||| | | ||| ||||| || || | | Sbjct 4022 AGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATGCCAATTAAA 3963 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 || || || ||||| ||| | |||| ||| || || | ||| ||||| |||||| Sbjct 3962 CGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAATT 3903 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTT-----AAACATCAGACATG 16967 | | | |||||| |||| | ||| |||| | ||| | ||||||| Sbjct 3902 TCGACTATTTTATCCTCGCTCGGTTT--GTTGCGAATGTATCGTCGAAATACTAGACATG 3845 Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027 | ||||| ||||||||||| || || | || ||||| || ||| ||||| || Sbjct 3844 CAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGTCAAACCAC 3785 Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087 | | |||| |||| || | ||||||||| | || ||||| ||| ||| ||||| | Sbjct 3784 GTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAAAAATATCC 3725 Query 17088 CCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCC 17147 | || || | || || || | ||| ||||| || | | || || ||| ||||| Sbjct 3724 CTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAAATTATTAGAAATCC 3665 Query 17148 A--TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 | | || |||| | || |||| ||| | || |||||||| || || ||||| Sbjct 3664 AGCGTAATG--CCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTGCATTAAA 3607 Query 17206 TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 ||| | | |||| | | ||| |||||||| | | |||| |||||||| Sbjct 3606 TAAAAGCATTCTTTCTTTTTTGTCATCAATATACGTTTGCAAAAGTAATGAATACATTTC 3547 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 || || | ||||| || || || |||||||| |||||||| || ||||| | | || Sbjct 3546 TGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCTGTAACCTG 3487 Query 17326 AACTTCCACGTA-GAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384 ||| | | |||| |||||||| || |||||||| || || | || || || ||||| | Sbjct 3486 AACCT-CTCGTATAAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACTAGCGGCAA 3428 Query 17385 AAAACGCCAATATAT 17399 |||| || | |||| Sbjct 3427 AAAATGCAAGAATAT 3413 >seq67252 Length=1665 Score = 118 bits (130), Expect = 1e-21 Identities = 540/854 (63%), Gaps = 24/854 (3%) Strand=Plus/Plus Query 16672 TCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATT 16731 |||||| || ||||| || | |||||||||| ||| | || || | ||||| | Sbjct 496 TCTTTGATATTCGCTCACTTTTATTTCGAAAAAATTACTCTTATTATCAATTGATATTTG 555 Query 16732 CTCCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTAC--CCCAGTTCGGCG 16789 ||||| |||||||| ||||| | | | |||| | | ||| || | | Sbjct 556 TTCCATAAAATCAAATGGATT--TTCCGAATAATAATGATTAATACATCCAAAATTTTTT 613 Query 16790 ATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATA 16849 | | | |||| |||| ||||| || ||| |||||| || |||||||||||||| Sbjct 614 AAAAGTTTATCAGCTATGAATTCAATGTATAATTTCATTAAATCACAGTTCATTCCTATT 673 Query 16850 AGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATA 16909 | | ||||||||| || || |||| ||| ||||||| ||| Sbjct 674 ANNNN--------------CTGTCAAAAATTCTTTTTCAATAATAACAGCTTCCTGTATA 719 Query 16910 ATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTA--AGATGTTTAAACATCAGACATG 16967 || | ||| || | | | || ||||| | || |||||| | ||||||| Sbjct 720 ATTTT--CAAGATTTTATTATTATTGGGTTTGTTTTTTAAATATTTAAATAATAGACATG 777 Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027 | ||||| || || | || || ||||| |||||||||||| || || || Sbjct 778 CAAAATCACAGTGAAGGCCTTCATCTCTTGAAATAAGTTCGTTACTTTGCGTTAAACCAT 837 Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087 | |||| |||| |||| |||| | || || || || || ||| ||| || || | Sbjct 838 TTAAAATTCCACGTTCTTTTATCCAATAAATAGCAGCAAATGAACCACTAAAAAAAATTC 897 Query 17088 CCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCC 17147 | || || | ||||| || | | || || | | | | | ||| | | |||| Sbjct 898 CTTCAACAGCAGCAAATGCCACGAGTCTCTCTCCAAAGCTAACATGTTTTTCATTTATCC 957 Query 17148 ATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207 |||| |||| |||||||||| || |||||| || | | || | || | || Sbjct 958 ATTTTAATGCCCATTCGGCTTTTTTTTTAATGCAACTAATATTATGGATTGAATTTATTA 1017 Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 | | | || || | | || | || |||| | | || ||||||||||| | Sbjct 1018 AGGTATTTTGTTTATCTTTATCTTTAATGAGTGTATACAATAATAAACTGTACATTTCTG 1077 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 ||||||| || || | || || || || || || ||||||| ||||| ||||||| Sbjct 1078 AGTGTATATTTTCAACTGCAATTTGCAAACCATAGAAGCATCTTGCTTCACTAATTTGAA 1137 Query 17328 CTTCCACGT-AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAA 17386 | | ||| | | |||| ||| || | ||||||||| || || ||||| || | || ||| Sbjct 1138 CAT-CACATAAAAATCTTTCTGCCAAATTTTCGTTGACTATTCCGTCACTTGTTGCAAAA 1196 Query 17387 AACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTT 17446 || || | |||| || || | | |||| | | |||| ||| || || Sbjct 1197 AAAGCGAGAATATAAGAAAAAAAGTGTCTTTCATTTTCACTTAGAAGTAACCAATCATTG 1256 Query 17447 AAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATAC 17506 ||||||| | ||| |||||||| ||||| | || ||||| || ||||||||| Sbjct 1257 TAATCTTTTCCCAAATCTACTTCTTCCACAGTCCATATACAAGCCAAAGCTTTTTTATAC 1316 Query 17507 ATATTCCAAATATC 17520 |||||||| | ||| Sbjct 1317 ATATTCCACAAATC 1330 >seq77187 Length=4015 Score = 104 bits (114), Expect = 2e-17 Identities = 204/300 (68%), Gaps = 4/300 (1%) Strand=Plus/Minus Query 16764 ATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGC 16823 ||| ||||| | |||| ||| || | ||| ||||| || |||| || || Sbjct 3260 ATACTTTAGGACATCCCAATTCAAGGAGCAGTCTGTCCGCAACGTATTCAATGTAAGTTT 3201 Query 16824 ACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTT 16883 |||||||||||| |||||||| || ||| || || | || || || || ||| | Sbjct 3200 TCATTAATTCGCAATTCATTCCAATGAGATTCACGGGCAACGCATCGGTTAAGAATTCCT 3141 Query 16884 GCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTT 16943 | ||||||| ||||| ||||||||||| || |||| ||||| || | | |||| Sbjct 3140 GTTCTATAAGCACCGCCTCCTTAATAATTTGGGCGACTCTTTCCT--GATAGGGCTTGTT 3083 Query 16944 TAAGATGT--TTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGAT 17001 ||||| || |||| || ||| || ||||||||||| | || ||||| | || Sbjct 3082 CTCGATGTACTTGAACAGCAAACACGCAAAATCGCAATGAAGCCCTTCGTCGCGCGAAAT 3023 Query 17002 AAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGC 17061 ||||| || || || || || ||||| |||||| || || | ||||||||| || Sbjct 3022 CAGTTCATTGCTGAACGTTAAACCAGGCATAAGTCCTCGCTTTTTGAGCCAAAATATGGC 2963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516888672900600