Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq96803 194 2e-44
seq67252 167 2e-36
seq95739 147 2e-30
>seq96803
Length=7468
Score = 194 bits (214), Expect = 2e-44
Identities = 483/726 (67%), Gaps = 13/726 (2%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| || || | ||| ||||||||||| || ||| ||||||| || || || || | |
Sbjct 4141 TTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGAAATTTGCT 4082
Query 15972 CCATAAAATCAAAGGGATTAGTAG-CTGAAAATATCTTAGAGTACCCCAGTTCCGTAACT 16030
||||||||||||| || || | |||||| ||| || | | | | |||| | |
Sbjct 4081 CCATAAAATCAAAAGGGTTTTCCGACTGAAA-TATTTTTGGACAATCTAATTCCATGAGA 4023
Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090
| | |||| || || |||| || || || ||| | |||||| || || || |
Sbjct 4022 AGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATGCCAATTAAA 3963
Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150
|| || || ||||| | || ||||| |||||| || | ||| |||||| ||| ||
Sbjct 3962 CGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAATT 3903
Query 16151 TCGGTGGCTCGTGTTTCAGA---CGGTGTATGGTTTAGGT---GTTTAAACATTAGACAC 16204
||| || | | || |||| | | | | || || ||| | ||||||
Sbjct 3902 TCGA---CTATTTTATCCTCGCTCGGTTTGTTGCGAATGTATCGTCGAAATACTAGACAT 3846
Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264
|| || || ||||||| |||||| || | || ||||| ||| |||||| || ||
Sbjct 3845 GCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGTCAAACCA 3786
Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324
| | | |||| |||| || | ||| ||||| | ||||| || || ||| |||||
Sbjct 3785 CGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAAAAATATC 3726
Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATC 16384
|| ||||||| || || || | ||| ||||| || | | ||| |||||| ||||
Sbjct 3725 CCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAAATTATTAGAAATC 3666
Query 16385 CATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444
|| | |||||| || |||| || | ||| |||||||| || || |||||
Sbjct 3665 CAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTGCATTAAAT 3606
Query 16445 AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCT 16504
|| | | |||| | | || |||||||| | | ||||| |||||||||
Sbjct 3605 AAAAGCATTCTTTCTTTTTTGTCATCAATATACGTTTGCAAAAGTAATGAATACATTTCT 3546
Query 16505 GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGT 16564
|| || | ||||| || || || ||||||||||| ||||| || || || | | ||
Sbjct 3545 GAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCTGTAACCTGA 3486
Query 16565 ACTTCCACGTA-AAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAA 16623
|| | | |||| ||||||||| || || || ||||| || | || ||||| || |||||
Sbjct 3485 ACCT-CTCGTATAAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACTAGCGGCAAA 3427
Query 16624 AAACGC 16629
||| ||
Sbjct 3426 AAATGC 3421
>seq67252
Length=1665
Score = 167 bits (184), Expect = 2e-36
Identities = 391/584 (67%), Gaps = 12/584 (2%)
Strand=Plus/Plus
Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240
|||| | |||||| | |||||| || || || || || || ||||| ||||| |||
Sbjct 753 TTTAAATATTTAAATAATAGACATGCAAAATCACAGTGAAGGCCTTCATCTCTTGAAATA 812
Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTT----TTCCTCGTTTCTTTAACCAGAATAT 16296
|||||||| ||||| || |||| |||| |||| |||| ||| | ||
Sbjct 813 AGTTCGTTACTTTGCGTTAAACC----ATTTAAAATTCCACGTTCTTTTATCCAATAAAT 868
Query 16297 CGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTC 16356
||||||||||| || ||| || || || ||||||| ||||| || | | || ||
Sbjct 869 AGCAGCAAATGAACCACTAAAAAAAATTCCTTCAACAGCAGCAAATGCCACGAGTCTCTC 928
Query 16357 CGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTAT 16416
| | || ||| ||| | | |||||||| | ||||||||||||||| ||| ||
Sbjct 929 TCCAAAGCTAACATGTTTTTCATTTATCCATTTTAATGCCCATTCGGCTTTTTTTTTAAT 988
Query 16417 ACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATA 16476
||| || | | || | || | || | | || || | |||| | ||
Sbjct 989 GCAACTAATATTATGGATTGAATTTATTAAGGTATTTTGTTTATCTTTATCTTTAATGAG 1048
Query 16477 CGTAT-CAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATC 16535
|||| |||| | |||||||||||||||||||||||| || || | || || || || |
Sbjct 1049 TGTATACAATAA-TAAACTGTACATTTCTGAGTGTATATTTTCAACTGCAATTTGCAAAC 1107
Query 16536 CATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGT-AAAATCGTTCCGCCAGGTTC 16594
|||||||||||| || || ||||| || | ||| | |||||| ||| |||| ||
Sbjct 1108 CATAGAAGCATCTTGCTTCACTAATTTGAACAT-CACATAAAAATCTTTCTGCCAAATTT 1166
Query 16595 TCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTT 16654
|| || || || |||||||||| |||||||| || | || | || || | | ||
Sbjct 1167 TCGTTGACTATTCCGTCACTTGTTGCAAAAAAAGCGAGAATATAAGAAAAAAAGTGTCTT 1226
Query 16655 TCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGC 16714
|| | | |||| |||||| || ||||||| | ||| ||||||||
Sbjct 1227 TCATTTTCACTTAGAAGTAACCAATCATTGTAATCTTTTCCCAAATCTACTTCTTCCACA 1286
Query 16715 GTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATC 16758
||||| | | ||||| || ||||||||||| ||||| | |||
Sbjct 1287 GTCCATATACAAGCCAAAGCTTTTTTATACATATTCCACAAATC 1330
>seq95739
Length=7868
Score = 147 bits (162), Expect = 2e-30
Identities = 481/733 (66%), Gaps = 27/733 (4%)
Strand=Plus/Plus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| || || | ||| ||||||||| || || ||||||| || || || |||| |
Sbjct 317 TTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATGCT 376
Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031
||||||||||||| ||||| | ||||||| || | | ||| ||| ||| |
Sbjct 377 CCATAAAATCAAATGGATTTTCCACGCAAAATATTTTTGGACATTCCAATTCAATAAGAA 436
Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCG--CAATTAATTCCTATAAG 16089
|||| || |||||||| || || || ||| ||| || ||||| || || || |
Sbjct 437 GCTTATCGGCAACAAATTCAATGTACTGTTTCAT-AAG-CGAACAATTCATGCCGATTAA 494
Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149
|| || | || | ||| ||||| |||||| || | ||| |||||| ||| ||
Sbjct 495 AGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAAT 554
Query 16150 ATCGGTGG----CTCGTGTTTCAGACGGTGTATGGTTTAGGT-GTTTAAACATTAGACAC 16204
||| | ||| || | | |||| | || | | ||| | ||||||
Sbjct 555 TTCGCTAATTTTCTCTTGGCTAGGTT--TGTAGCGGATATATCGACGAAATACTAGACAT 612
Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264
|| ||||| || ||||||||||| || | ||| | ||| ||| |||||| || ||
Sbjct 613 GCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGCTAAAAGTCAAACCA 672
Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324
| || | | || |||| || | ||| ||||| || ||||| || || || ||||||
Sbjct 673 GACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAACCACTGAAAAATATA 732
Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG---A 16381
|| || |||| ||||| || | ||| ||||| | ||| | ||| || ||| |
Sbjct 733 CCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGAA---TCTGTACTACTTGAA 789
Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441
||||| | ||| | |||||| | || | ||| || ||||| || || |||
Sbjct 790 ATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAATGTTTCGATTGCATTA 849
Query 16442 AACAATTTCTC---TTTTTCCTGAATATCGAT-TATATACGTATCAATCAGTAAACTGTA 16497
|| || | || ||| | ||| || ||| | | | || || || ||
Sbjct 850 AATAAAAGCAAACGTTGTTCGTTGCAATCAATGTATGTTTGCAA-AAGCATGGAA---TA 905
Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557
||||||||| || | || || ||||| || ||||||||||| || || || || || |
Sbjct 906 CATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAACAACGTGCTTCTGT 965
Query 16558 TATTTGTACTTCCACGTA-AAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616
| || || | | |||| ||||||||| || || || ||||| || || || |||||||
Sbjct 966 AACCTGAACCT-CTCGTATAAATCGTTCTGCGAGATTTTCATTAACAATTCCATCACTTG 1024
Query 16617 CAGCAAAAAACGC 16629
| |||||||| ||
Sbjct 1025 CGGCAAAAAATGC 1037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510765255309400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |