Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq96803 194 2e-44 seq67252 167 2e-36 seq95739 147 2e-30 >seq96803 Length=7468 Score = 194 bits (214), Expect = 2e-44 Identities = 483/726 (67%), Gaps = 13/726 (2%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| || || | ||| ||||||||||| || ||| ||||||| || || || || | | Sbjct 4141 TTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGAAATTTGCT 4082 Query 15972 CCATAAAATCAAAGGGATTAGTAG-CTGAAAATATCTTAGAGTACCCCAGTTCCGTAACT 16030 ||||||||||||| || || | |||||| ||| || | | | | |||| | | Sbjct 4081 CCATAAAATCAAAAGGGTTTTCCGACTGAAA-TATTTTTGGACAATCTAATTCCATGAGA 4023 Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090 | | |||| || || |||| || || || ||| | |||||| || || || | Sbjct 4022 AGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATGCCAATTAAA 3963 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || || || ||||| | || ||||| |||||| || | ||| |||||| ||| || Sbjct 3962 CGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAATT 3903 Query 16151 TCGGTGGCTCGTGTTTCAGA---CGGTGTATGGTTTAGGT---GTTTAAACATTAGACAC 16204 ||| || | | || |||| | | | | || || ||| | |||||| Sbjct 3902 TCGA---CTATTTTATCCTCGCTCGGTTTGTTGCGAATGTATCGTCGAAATACTAGACAT 3846 Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 || || || ||||||| |||||| || | || ||||| ||| |||||| || || Sbjct 3845 GCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGTCAAACCA 3786 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 | | | |||| |||| || | ||| ||||| | ||||| || || ||| ||||| Sbjct 3785 CGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAAAAATATC 3726 Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATC 16384 || ||||||| || || || | ||| ||||| || | | ||| |||||| |||| Sbjct 3725 CCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAAATTATTAGAAATC 3666 Query 16385 CATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444 || | |||||| || |||| || | ||| |||||||| || || ||||| Sbjct 3665 CAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTGCATTAAAT 3606 Query 16445 AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCT 16504 || | | |||| | | || |||||||| | | ||||| ||||||||| Sbjct 3605 AAAAGCATTCTTTCTTTTTTGTCATCAATATACGTTTGCAAAAGTAATGAATACATTTCT 3546 Query 16505 GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGT 16564 || || | ||||| || || || ||||||||||| ||||| || || || | | || Sbjct 3545 GAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCTGTAACCTGA 3486 Query 16565 ACTTCCACGTA-AAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAA 16623 || | | |||| ||||||||| || || || ||||| || | || ||||| || ||||| Sbjct 3485 ACCT-CTCGTATAAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACTAGCGGCAAA 3427 Query 16624 AAACGC 16629 ||| || Sbjct 3426 AAATGC 3421 >seq67252 Length=1665 Score = 167 bits (184), Expect = 2e-36 Identities = 391/584 (67%), Gaps = 12/584 (2%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 |||| | |||||| | |||||| || || || || || || ||||| ||||| ||| Sbjct 753 TTTAAATATTTAAATAATAGACATGCAAAATCACAGTGAAGGCCTTCATCTCTTGAAATA 812 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTT----TTCCTCGTTTCTTTAACCAGAATAT 16296 |||||||| ||||| || |||| |||| |||| |||| ||| | || Sbjct 813 AGTTCGTTACTTTGCGTTAAACC----ATTTAAAATTCCACGTTCTTTTATCCAATAAAT 868 Query 16297 CGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTC 16356 ||||||||||| || ||| || || || ||||||| ||||| || | | || || Sbjct 869 AGCAGCAAATGAACCACTAAAAAAAATTCCTTCAACAGCAGCAAATGCCACGAGTCTCTC 928 Query 16357 CGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTAT 16416 | | || ||| ||| | | |||||||| | ||||||||||||||| ||| || Sbjct 929 TCCAAAGCTAACATGTTTTTCATTTATCCATTTTAATGCCCATTCGGCTTTTTTTTTAAT 988 Query 16417 ACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATA 16476 ||| || | | || | || | || | | || || | |||| | || Sbjct 989 GCAACTAATATTATGGATTGAATTTATTAAGGTATTTTGTTTATCTTTATCTTTAATGAG 1048 Query 16477 CGTAT-CAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATC 16535 |||| |||| | |||||||||||||||||||||||| || || | || || || || | Sbjct 1049 TGTATACAATAA-TAAACTGTACATTTCTGAGTGTATATTTTCAACTGCAATTTGCAAAC 1107 Query 16536 CATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGT-AAAATCGTTCCGCCAGGTTC 16594 |||||||||||| || || ||||| || | ||| | |||||| ||| |||| || Sbjct 1108 CATAGAAGCATCTTGCTTCACTAATTTGAACAT-CACATAAAAATCTTTCTGCCAAATTT 1166 Query 16595 TCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTT 16654 || || || || |||||||||| |||||||| || | || | || || | | || Sbjct 1167 TCGTTGACTATTCCGTCACTTGTTGCAAAAAAAGCGAGAATATAAGAAAAAAAGTGTCTT 1226 Query 16655 TCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGC 16714 || | | |||| |||||| || ||||||| | ||| |||||||| Sbjct 1227 TCATTTTCACTTAGAAGTAACCAATCATTGTAATCTTTTCCCAAATCTACTTCTTCCACA 1286 Query 16715 GTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATC 16758 ||||| | | ||||| || ||||||||||| ||||| | ||| Sbjct 1287 GTCCATATACAAGCCAAAGCTTTTTTATACATATTCCACAAATC 1330 >seq95739 Length=7868 Score = 147 bits (162), Expect = 2e-30 Identities = 481/733 (66%), Gaps = 27/733 (4%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| || || | ||| ||||||||| || || ||||||| || || || |||| | Sbjct 317 TTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATGCT 376 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 ||||||||||||| ||||| | ||||||| || | | ||| ||| ||| | Sbjct 377 CCATAAAATCAAATGGATTTTCCACGCAAAATATTTTTGGACATTCCAATTCAATAAGAA 436 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCG--CAATTAATTCCTATAAG 16089 |||| || |||||||| || || || ||| ||| || ||||| || || || | Sbjct 437 GCTTATCGGCAACAAATTCAATGTACTGTTTCAT-AAG-CGAACAATTCATGCCGATTAA 494 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 || || | || | ||| ||||| |||||| || | ||| |||||| ||| || Sbjct 495 AGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAAT 554 Query 16150 ATCGGTGG----CTCGTGTTTCAGACGGTGTATGGTTTAGGT-GTTTAAACATTAGACAC 16204 ||| | ||| || | | |||| | || | | ||| | |||||| Sbjct 555 TTCGCTAATTTTCTCTTGGCTAGGTT--TGTAGCGGATATATCGACGAAATACTAGACAT 612 Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 || ||||| || ||||||||||| || | ||| | ||| ||| |||||| || || Sbjct 613 GCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGCTAAAAGTCAAACCA 672 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 | || | | || |||| || | ||| ||||| || ||||| || || || |||||| Sbjct 673 GACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAACCACTGAAAAATATA 732 Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG---A 16381 || || |||| ||||| || | ||| ||||| | ||| | ||| || ||| | Sbjct 733 CCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGAA---TCTGTACTACTTGAA 789 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441 ||||| | ||| | |||||| | || | ||| || ||||| || || ||| Sbjct 790 ATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAATGTTTCGATTGCATTA 849 Query 16442 AACAATTTCTC---TTTTTCCTGAATATCGAT-TATATACGTATCAATCAGTAAACTGTA 16497 || || | || ||| | ||| || ||| | | | || || || || Sbjct 850 AATAAAAGCAAACGTTGTTCGTTGCAATCAATGTATGTTTGCAA-AAGCATGGAA---TA 905 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 ||||||||| || | || || ||||| || ||||||||||| || || || || || | Sbjct 906 CATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAACAACGTGCTTCTGT 965 Query 16558 TATTTGTACTTCCACGTA-AAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616 | || || | | |||| ||||||||| || || || ||||| || || || ||||||| Sbjct 966 AACCTGAACCT-CTCGTATAAATCGTTCTGCGAGATTTTCATTAACAATTCCATCACTTG 1024 Query 16617 CAGCAAAAAACGC 16629 | |||||||| || Sbjct 1025 CGGCAAAAAATGC 1037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510765255309400