Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq31699 98.7 8e-16 seq101445 82.4 6e-11 >seq31699 Length=2351 Score = 98.7 bits (108), Expect = 8e-16 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 22145 GCACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTCGGCCGGTGA 22204 ||| |||||||| |||||||||| || |||| | || || ||||| || |||||| Sbjct 460 GCATGGCTTTCATGTGCACGAATTCGGTGACAACACTAATGGCTGCACATCTGCCGGTCC 519 Query 22205 GCATTTTAATCCCACCAATGAGGACCACGGCGCTCCCGATGCTGAAATTAGGCATGTTGG 22264 ||| || ||||||| ||| | || ||||||||||| || | | ||| ||| ||||| || Sbjct 520 GCACTTCAATCCCAACAACAAAGAACACGGCGCTCCGGAGGATCAAAATAGACATGTCGG 579 Query 22265 CGACTTGGGCAA 22276 ||| ||||| || Sbjct 580 CGATTTGGGTAA 591 >seq101445 Length=6345 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 25122 ATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAA 25181 ||||||||||||||||| | |||| | || ||||||| ||||| |||||||| Sbjct 1400 ATTGCCGATAAAGAAGGATCATCACCAGATAAGCAGCGACTTATGTTTGCCGGCAAACAC 1341 Query 25182 TTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAA 25221 ||||||||| ||||| |||||||||| ||||| |||| Sbjct 1340 TTGGAAGATGACAAAAAACTGGCCGATTATAATATACAAA 1301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410288406224630