Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq77187 102 8e-17 >seq77187 Length=4015 Score = 102 bits (112), Expect = 8e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 ||||||||||||||||| || || || || ||||| || | || |||||||| || || Sbjct 2963 GCCATATTTTGGCTCAAAAAGCGAGGACTTATGCCTGGTTTAACGTTCAGCAATGAACTG 3022 Query 117152 ATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAG 117202 || || | ||||| || || |||||||| ||||| ||||||||||||||| Sbjct 3023 ATTTCGCGCGACGAAGGGCTTCATTGCGATTTTGCGTGTTTGCTGTTCAAG 3073 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 116603 CGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAG 116662 ||||| || | || || || ||||| | || || |||| ||||| || || || ||| Sbjct 1623 CGGTTTGTAGTGTTTCCTATTCAATATCACGATATATGGCAGATGTATAAGAAAGCTGAG 1682 Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC 116722 || ||||||||||| || || ||||||||||| | ||| ||| |||||| || Sbjct 1683 GCATCGTTCTGGACAGTGGAAGAGGTGGACCTCGGAAGGGATTTGAGTGACTGGAAGACA 1742 Query 116723 TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGAC 116782 ||| | |||||| || ||||| ||||| || || || |||||||| || || Sbjct 1743 CTGAGTAAAGGCGAGCGTCACTTCATATCACACGTTCTCGCGTTCTTCGCCGCAAGTGAT 1802 Query 116783 GGCATCGTCAACGAGAATCTGGT 116805 ||||| || || || ||| |||| Sbjct 1803 GGCATTGTTAATGAAAATTTGGT 1825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514565225829200