Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq100917 113 4e-20 seq44606 86.0 5e-12 seq39385 82.4 7e-11 >seq100917 Length=15418 Score = 113 bits (124), Expect = 4e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA-- 118583 || ||||| || | ||| |||||||| || |||||||||||||| ||||| | | Sbjct 7772 CAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCT--TAGTGTTCTTCCG 7715 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 || || | |||||| |||||| | || | ||||||||||| ||||| |||||||||||| Sbjct 7714 TCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGAATGCCCTCCTTG 7655 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||| || || || | |||| |||||||| ||| || |||| || | Sbjct 7654 TCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACTTCGAGCGTGATT 7595 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || || || |||||||| Sbjct 7594 GTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560 >seq44606 Length=634 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 47174 CAATGTTACCCAGATCGCCTACGTGACGCTCGGCGGCGTTGGGAGCGCCGTGATTGCGGC 47233 |||||||||||| |||||| || || || |||| || | || |||||||||| | Sbjct 115 CAATGTTACCCAAATCGCCCACATGTCGGTCGGTATCGGTTGGCGCGCCGTGATCTTTGT 174 Query 47234 CCAACGGATTATAGTGTTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAATTCGT 47293 |||| ||| |||| |||||| ||| | |||| | ||| ||| |||||||||| Sbjct 175 TATACGGGTTAAAGTGAGCGCCGGTCGATGCACAGCTATCGCTGAGGTCACCGAATTCGT 234 Query 47294 GCACGTGAAATCCGTGA 47310 |||| ||||| |||||| Sbjct 235 GCACATGAAAGCCGTGA 251 >seq39385 Length=5141 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||| || |||||||| | || | ||| || || ||||| |||||| |||| Sbjct 206 TTCTGAATATTATAATCGCTGAGTGTTCTTCCATCTTCCAGTTGTTTGCCAGCGAAGATC 147 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || ||||||||||||||||| ||||| |||||||| Sbjct 146 AGTCGCTGCTGATCGGGAGGAATGCCTTCCTTGTC 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433293500309140