Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq72213 105 8e-18
seq72212 105 8e-18
seq86681 104 3e-17
seq72211 104 3e-17
seq100917 100 3e-16
>seq72213
Length=1366
Score = 105 bits (116), Expect = 8e-18
Identities = 72/81 (89%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||| || |||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 81 AAAAGTTAACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 22
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||||||
Sbjct 21 TAACCACTATACTACCGAGGA 1
>seq72212
Length=11577
Score = 105 bits (116), Expect = 8e-18
Identities = 72/81 (89%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 81 AAAAAAGTGCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 22
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||||||
Sbjct 21 TAACCACTATACTACCGAGGA 1
>seq86681
Length=5981
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1280 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1339
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 1340 TACTACCGAGGA 1351
>seq72211
Length=440
Score = 104 bits (114), Expect = 3e-17
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
|| |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 75 TTGCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 16
Query 60123 CTATACTACCGAGGA 60137
|||||||||||||||
Sbjct 15 CTATACTACCGAGGA 1
>seq100917
Length=15418
Score = 100 bits (110), Expect = 3e-16
Identities = 167/239 (70%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| | |||| ||||| ||| | ||| ||| || || || ||||||||
Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || | |||| |||| ||| || ||||||||||| | |||||||| || | ||
Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| || |||||||||| ||| | || | || | || | | ||||| || |||||
Sbjct 7666 ATGCCCTCCTTGTCC-TGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCAC 7608
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCGA 43194
|||| |||||| || || || || || ||||| || || || |||||||| ||| ||
Sbjct 7607 TTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTTGTCGCTGA 7549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571091784772600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |