Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq100917 95.1 8e-15
seq94648 82.4 5e-11
>seq100917
Length=15418
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| | ||| | ||||||||| || | || ||||||||||||||||| |||
Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | |||| || ||||| ||||| ||||| || | ||||||||| || ||
Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | || | || | || || ||
Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||| || || || ||||| || ||||| || ||||||||
Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560
>seq94648
Length=7301
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/198 (70%), Gaps = 14/198 (7%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGG--ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256
|||||||||| ||| || ||| | | || || ||||| |||| || ||||| | |
Sbjct 5102 TCTTTCTGTACGTTATAATCGCTTAAAACT--CGTTCGTCTTCCAGTTGTTTGCCGCCAA 5159
Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316
| || || | |||||||| || || | |||||| || ||||| |||||| |||||
Sbjct 5160 ATATCAGTCTTTGCTGGTCAACAGGAATGCTCTCTTTATCGGCAATCTTTGACTTTAC-- 5217
Query 34317 CGGCTATCGAA-----TCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGT 34371
| | ||| || |||| ||| ||||| | ||| || |||||||| | | ||
Sbjct 5218 ---CAGTTGAACACTGTCTGTCGGTTCCACGTCTAACGTAATAGTTTTGCCATTCAATGT 5274
Query 34372 TTTCACAAAGATCTGCAT 34389
|| ||||||||||||||
Sbjct 5275 CTTAACAAAGATCTGCAT 5292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322672172655200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |