Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq100917 95.1 8e-15 seq94648 82.4 5e-11 >seq100917 Length=15418 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| | ||| | ||||||||| || | || ||||||||||||||||| ||| Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | |||| || ||||| ||||| ||||| || | ||||||||| || || Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | || | || | || || || Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || || ||||| || ||||| || |||||||| Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560 >seq94648 Length=7301 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/198 (70%), Gaps = 14/198 (7%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGG--ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256 |||||||||| ||| || ||| | | || || ||||| |||| || ||||| | | Sbjct 5102 TCTTTCTGTACGTTATAATCGCTTAAAACT--CGTTCGTCTTCCAGTTGTTTGCCGCCAA 5159 Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 | || || | |||||||| || || | |||||| || ||||| |||||| ||||| Sbjct 5160 ATATCAGTCTTTGCTGGTCAACAGGAATGCTCTCTTTATCGGCAATCTTTGACTTTAC-- 5217 Query 34317 CGGCTATCGAA-----TCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGT 34371 | | ||| || |||| ||| ||||| | ||| || |||||||| | | || Sbjct 5218 ---CAGTTGAACACTGTCTGTCGGTTCCACGTCTAACGTAATAGTTTTGCCATTCAATGT 5274 Query 34372 TTTCACAAAGATCTGCAT 34389 || |||||||||||||| Sbjct 5275 CTTAACAAAGATCTGCAT 5292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322672172655200