Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq67252 329 3e-85 seq95739 307 1e-78 seq96803 289 3e-73 seq50692 163 3e-35 >seq67252 Length=1665 Score = 329 bits (364), Expect = 3e-85 Identities = 577/842 (69%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 |||||||||| || ||| | |||| || ||||| | || || | ||| || | || Sbjct 498 TTTGATATTCGCTCACTTTTATTTCGAAAAAATTACTCTTATTATCAATTGATATTTGTT 557 Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATA 16064 ||||||||||||| ||||||| ||| |||| | ||| ||||| || | || | Sbjct 558 CCATAAAATCAAATGGATTTTCCGAATAATAATGATTAATACATCCAAAATTTTTTAAAA 617 Query 16065 ATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATT 16124 | |||| || | ||||| || || ||||||||||||||||||||||||||||| Sbjct 618 GTTTATCAGCTATGAATTCAATGTATAATTTCATTAAATCACAGTTCATTCCTATTANNN 677 Query 16125 TAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATAT 16184 |||| ||||| | |||||| ||| |||| ||||| || || | Sbjct 678 N--------------CTGTCAAAAATTCTTTTTCAATAATAACAGCTTCCTGTATAATTT 723 Query 16185 CTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAAT 16244 | | | |||| || |||| ||| | |||||| | || ||| ||||||| Sbjct 724 TCAAGATTTTATTATTATTGGGTTTGTTTTTTAAATATTTAAATAATAGACATGCAAAAT 783 Query 16245 CACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTA 16304 |||| || | ||||| || || || | ||||| || | ||| | | Sbjct 784 CACAGTGAAGGCCTTCATCTCTTGAAATAAGTTCGTTACTTTGCGTTAAACCATTTAAAA 843 Query 16305 GTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAA 16364 ||| |||| ||| |||||| | ||||| |||||||||||| ||| || || ||||||| Sbjct 844 TTCCACGTTCTTTTATCCAATAAATAGCAGCAAATGAACCACTAAAAAAAATTCCTTCAA 903 Query 16365 CTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAt-ttttactttctatccatttt 16423 | || |||||||| || | || ||| || | | || |||| | || |||||||||| Sbjct 904 CAGCAGCAAATGCCACGAGTCTCTCTCCAAAGCTAACATGTTTTTCATT-TATCCATTTT 962 Query 16424 ttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAA 16483 ||||| | ||||||| ||||| || | || || | |||| ||| | ||| | Sbjct 963 AATGCCCATTCGGCTTTTTTTTTAATGCAACTAATATTATGGATTGAATTTATTAAGGTA 1022 Query 16484 tttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGA 16543 |||| || | ||||| ||| |||| | || |||||| ||||||||||| || Sbjct 1023 TTTTGTTTATCTTTATCTTTAATGAGTGTATACAATAATAAACTGTACATTTCTGAGTGT 1082 Query 16544 ATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCA 16603 ||||| || | ||| || || |||||||| |||||||| ||||| ||||| || ||| Sbjct 1083 ATATTTTCAACTGCAATTTGCAAACCATAGAAGCATCTTGCTTCACTAATTTGAACATCA 1142 Query 16604 GAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCA 16663 | |||| |||||||| || |||||||| |||||||| || || | ||||||||| || Sbjct 1143 CATAAAAATCTTTCTGCCAAATTTTCGTTGACTATTCCGTCACTTGTTGCAAAAAAAGCG 1202 Query 16664 AGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTAACCAGTCAGAAAAATCT 16723 || || | || ||| | | |||| || || || |||||| ||| ||||| Sbjct 1203 AGAATATAAGAAAAAAAGTGTCTTTCATTTTCACTTAGAAGTAACCAATCATTGTAATCT 1262 Query 16724 TTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTC 16783 ||| ||||| || ||||| |||||||| | | |||| | ||| ||||||||||| ||| Sbjct 1263 TTTCCCAAATCTACTTCTTCCACAGTCCATATACAAGCCAAAGCTTTTTTATACATATTC 1322 Query 16784 CA 16785 || Sbjct 1323 CA 1324 >seq95739 Length=7868 Score = 307 bits (340), Expect = 1e-78 Identities = 626/907 (69%), Gaps = 32/907 (4%) Strand=Plus/Plus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 ||||||||| | ||||||||| || | |||| | ||||| || ||||| |||||||| Sbjct 301 GACATAACTAAATGTTTTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCT 360 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCG-CA 16047 || |||||||||| |||||||||||||| ||||||| ||| | ||||| | | || Sbjct 361 TCCAATGAAATATGCTCCATAAAATCAAATGGATTTTCCACGCAAAA-TATTTTTGGACA 419 Query 16048 TCCCAATTCCAACAATAATCT-ATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106 | ||||||| || || || || ||| || |||||||| || ||||||||||| | || Sbjct 420 TTCCAATTC-AATAAGAAGCTTATCGGCAACAAATTCAATGTACTGTTTCATAAGCGAAC 478 Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAA 16166 | ||||| || ||||| ||| || | ||| || ||| ||| | || ||| || || Sbjct 479 AATTCATGCCGATTAAAGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAA 538 Query 16167 CCGCTTCAATGATTATATCTCTTACTACACTATTTAACGG--AGGGTT-TA----ATAAG 16219 | ||||| || || || || | | || || || ||| || || ||| Sbjct 539 CGGCTTCTCGAATAATTTCGCTAATTTT-CTCTT----GGCTAGGTTTGTAGCGGATATA 593 Query 16220 T-GTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278 | | ||| | || ||| ||||| ||||| || | |||||| || | | ||||| || Sbjct 594 TCGACGAAATACTAGACATGCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTC 653 Query 16279 GTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA 16338 || ||| || | ||| | || || || |||| ||| ||||||||||| || ||||| Sbjct 654 ATTGCTAAAAGTCAAACCAGACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAA 713 Query 16339 TGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACG- 16397 |||||| || ||||||||||| || || ||||||||||| || || ||| ||| Sbjct 714 GGAACCACTGAAAAATATACCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGA 773 Query 16398 TTCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACA-GTTC 16456 ||| | ||||| ||||| | | ||| | |||||| | || ||||| | Sbjct 774 ATCT-GTACTACTTGAAATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCA 832 Query 16457 ATGTTCTCTATTGCATTAAATAAA---TAAtttttttCTTTGCTATCTAAAATATAAGTA 16513 ||||| || ||||||||||||||| || || ||| |||| ||| ||| || || Sbjct 833 ATGTT-TCGATTGCATTAAATAAAAGCAAACGTTGTTCGTTGCAATC---AATGTATGTT 888 Query 16514 TCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAA 16573 | | || | ||||||||||||||| | ||| || || || || ||||| |||||| Sbjct 889 TGCAAAAGCATGGAATACATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAA 948 Query 16574 AAGCATCTAGCTTCGGATATTTGTACTTCAGAGTA-AAACCTTTCTGCTAAGTTTTCGTT 16632 || || | ||||| | | || || || ||| ||| | |||||| | ||||| || Sbjct 949 AAACAACGTGCTTCTGTAACCTGAACCTC-TCGTATAAATCGTTCTGCGAGATTTTCATT 1007 Query 16633 AACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTT 16692 ||| |||||||| || || |||||||| || || || | | | |||| || || | Sbjct 1008 AACAATTCCATCACTTGCGGCAAAAAATGCGAGAATATATGATAAAAAACGTTGCTCATC 1067 Query 16693 ATC--TGAAAGTTTTA-ACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGT 16749 | | || | ||| ||| ||| | ||| | | ||| ||||| ||||| || Sbjct 1068 CGCGTTCAATTTGTTATTCCAATCAAATCGATCACGTCCAAGATCAACCTCCTCTACTGT 1127 Query 16750 CCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAA 16809 |||||| ||||| || ||||||||||||| ||||| || | || |||| ||||| Sbjct 1128 CCAAAACGAAGCTTGAGATTTTTTATACATTTGCCATAAATCGTAATACTCAATTGGAAA 1187 Query 16810 CACAACA 16816 ||||||| Sbjct 1188 CACAACA 1194 >seq96803 Length=7468 Score = 289 bits (320), Expect = 3e-73 Identities = 605/891 (68%), Gaps = 28/891 (3%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 |||||||||||| | ||||| ||||| || ||||| |||||||||| |||||||| | Sbjct 4143 TTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGAAATTTG 4084 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCG-CATCCCAATTCCAACA 16061 ||||||||||||||||| |||| || | | ||||| | | || | ||||||| | Sbjct 4083 CTCCATAAAATCAAAAGGGTTTTCCGACTGAAA-TATTTTTGGACAATCTAATTCCATGA 4025 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 | | |||| || || |||| || ||||||||||| | || ||||| || |||| Sbjct 4024 GAAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATGCCAATTA 3965 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 | ||| || | || || || ||| | || ||| || ||| ||||| || | Sbjct 3964 AACGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAA 3905 Query 16182 TATCTCTTACTACACTATTTAA----CGGAGGGTTTAATAAG--TGTTT-----AAACAT 16230 | || ||||||| | || ||||| | | ||| | ||| | Sbjct 3904 TTTCG--------ACTATTTTATCCTCGCTCGGTTTGTTGCGAATGTATCGTCGAAATAC 3853 Query 16231 TATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGT 16290 || ||| |||||||||||||| |||||||| || | | |||| || || ||| || Sbjct 3852 TAGACATGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGT 3793 Query 16291 AAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAA 16350 | ||| | | || ||| |||| ||||||||||||||||| ||||| |||||| ||| Sbjct 3792 CAAACCACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAA 3733 Query 16351 GAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTT-CTAtttttac 16409 ||||| |||||||| || || |||||||| || || ||| | | | ||| || | Sbjct 3732 AAATATCCCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAAATT-AT 3674 Query 16410 tttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTG 16469 | ||||| | ||||| | ||| |||| || ||||| || | || |||| Sbjct 3673 TAGAAATCCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTG 3614 Query 16470 CATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTAT 16529 ||||||||||| || ||||||| | || |||||| || | | ||||| || Sbjct 3613 CATTAAATAAAAGCATTCTTTCTTTTTTGTCATCAATATACGTTTGCAAAAGTAATGAAT 3554 Query 16530 ACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGG 16589 ||||||||||||| | |||||| || || || ||||| ||||||||||| | ||||| | Sbjct 3553 ACATTTCTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCTG 3494 Query 16590 ATATTTGTACTTCAGAGTA-AAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTA 16648 | || || || ||| ||| | ||| || | ||||| ||||| | |||||| ||| Sbjct 3493 TAACCTGAACCTC-TCGTATAAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACTA 3435 Query 16649 GCTGCAAAAAACGCAAGTATGT-GTTTAATAAAAtt--tttttCGTTATCTGAAAGTTTT 16705 || |||||||| ||||| || | ||| ||| | || || | | | || Sbjct 3434 GCGGCAAAAAATGCAAGAATATACGATAAGAAACGTCGTTCATCCGGGTTTAATTTATTG 3375 Query 16706 AACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACA 16765 | ||| |||| | ||| | |||||| || || ||||| |||||||| ||||| | Sbjct 3374 ATCCAATCAGCACGATCACGTCCTAAATCAACTTCCTCTACTGTCCAAAATGAAGCTTGA 3315 Query 16766 GCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACA 16816 || ||||| ||||||| ||||| || | || | | |||||||| ||| Sbjct 3314 GCTTTTTTGTACATTTGCCATAAATCGTAATATTCTACTGGAAACACCACA 3264 >seq50692 Length=412 Score = 163 bits (180), Expect = 3e-35 Identities = 285/413 (69%), Gaps = 10/413 (2%) Strand=Plus/Plus Query 16348 AAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttttt 16407 ||| || || |||||||| || ||||| ||||| |||| || || | | | || Sbjct 3 AAAAAAAATTCCTTCAACAGCAGCAAAGGCAACTAATCTTTCTCCAAAATT---AATTGA 59 Query 16408 actttct---atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTC 16464 |||| || ||||| | ||| | |||||||| | ||| ||||| | || || Sbjct 60 ACTTCCTTTAATCCAAGACAATGACCATTCTGCTTTTTTTCTAATACAGTCAAAATTTTC 119 Query 16465 TATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAA 16524 ||||| || | ||| |||| ||| | ||| ||| |||| | || ||||| Sbjct 120 AATTGCGTTTATCAAAATATTTCTTTTTAATTCGTCTGTTATAAAAGTTTGTAAAAGTAA 179 Query 16525 ACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAA----AGCATC 16580 |||||||||||| | |||| ||| || ||||| || ||||||||||||| | || | Sbjct 180 ACTATACATTTCAGCGTGAACATTTTCAATTGCAATTTGAAAACCATAAANAAAAACAAC 239 Query 16581 TAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTC 16640 ||||||| ||||| || || |||| ||||| |||||||||||||| || |||| Sbjct 240 GAGCTTCGTTTATTTTGACATCTCTTAAAAATCTTTCGGCTAAGTTTTCGTTTACAATTC 299 Query 16641 CATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAA 16700 |||| || | ||||| || ||||||||||| | ||| |||| ||| || | | Sbjct 300 CATCACTTGTGGCAAAGAAAGCAAGTATGTGAGACAAAAAGTTTTGTTCATTTATAGTTA 359 Query 16701 GTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAA 16753 | || ||| |||| |||||||| |||||| | |||||| || |||||| Sbjct 360 GACTTTGCCAATCAGTCAAATCTTTACTTAAATCAATCTCTTCAACTGTCCAA 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461924927737000