Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq52387 107 2e-18
>seq52387
Length=8210
Score = 107 bits (118), Expect = 2e-18
Identities = 135/185 (73%), Gaps = 8/185 (4%)
Strand=Plus/Minus
Query 20209 CGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAA 20268
|| |||||||| ||||||||||| || ||||| ||||| ||| |||| ||||| |||||
Sbjct 1909 CGACAAGAGGGAGATTTGGGTCCCGTTTATGGGTTTCAGTGGCGACACTTTGGCGCTGAT 1850
Query 20269 TATGTTGACATGAACACAAATTATTTTGGACAA----GGAGTAGATCAATTACAAAATGT 20324
||| | || ||||||| | |||| | ||| || || ||||| || | |||||
Sbjct 1849 TATATCGATATGAACAGAGATTA----CGCCAATTTCGGTGTCGATCAGTTGAACAATGT 1794
Query 20325 TATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGC 20384
||| ||| || | ||| || || || ||||| |||| ||| |||| | ||||| ||
Sbjct 1793 TATCAATACTATCAGAACCAATCCTAATGACAGGCGAATGATTATATGTTCGTGGAATGC 1734
Query 20385 TAAAG 20389
||||
Sbjct 1733 AAAAG 1729
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549
|||| ||||||| || || ||||| ||||||||| | || | || | |||||||| ||
Sbjct 1395 GGGATTGGGTGTACCGTTTAATATCGCAAGTTATTCATTGTTGACTCACATGATTGCGCA 1336
Query 20550 TGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCT 20609
| || | | | || | |||||||| |||| ||||| || ||||||||||| || ||
Sbjct 1335 CATAACTGGTATGAATAGCGGTGACTTTATCCATACCATCGGTGACGCGCATATATATCT 1276
Query 20610 TAATCATATAGAACC 20624
|||| || |||||
Sbjct 1275 CGATCACATCGAACC 1261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398689977990025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |