Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq100917 105 5e-18 seq40065 86.0 5e-12 >seq100917 Length=15418 Score = 105 bits (116), Expect = 5e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 45108 CGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167 |||| ||||||| | | |||| || || || ||| ||||| |||||||| ||| Sbjct 7788 CGCCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGC 7729 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | |||| || | ||||| || ||||||||||||||||| || || |||| Sbjct 7728 TTAGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAG 7669 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | |||||||||||| ||| || ||| || | | | | ||||| ||||| Sbjct 7668 GAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCA 7609 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | || | || || ||||| || || || |||||||| || || ||||| ||| Sbjct 7608 CTTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTTG 7556 >seq40065 Length=761 Score = 86.0 bits (94), Expect = 5e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 45176 CGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCC 45235 || ||||| ||||||||||| ||||| ||||| | || |||||||| ||||| |||| Sbjct 516 CGCTCGTCTTCCAGTTGTTTGCCGGCAAATATTAGCCTTTGTTGGTCAACAGGCAAACCC 457 Query 45236 TCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACG 45295 || || || | ||| || ||||||| | || |||| ||||| || | Sbjct 456 TCTTTATCGGTAATCTTCGACTTAACCACTTGAACAGTGTCTGTCGGTTCCACGTCTAAC 397 Query 45296 GTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCC 45342 ||||| || ||||| |||| |||||||| || || ||||| | ||| Sbjct 396 GTAATTGTTTTGCCATTCAGTGTCTTCACGAATATATGCATTTCGCC 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394586262957445