Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq94648 120 3e-22 seq40065 91.5 1e-13 >seq94648 Length=7301 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| |||||||| || || | |||||||| || || | || || ||| ||| Sbjct 5292 ATGCAGATCTTTGTTAAGACATTGAATGGCAAAACTATTACGTTAGACGTGGAACCGACA 5233 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||||||| || || ||| ||| ||||| | ||||| || | || ||||||||| Sbjct 5232 GACAGTGTTCAACTGGTAAAGTCAAAGATTGCCGATAAAGAGAGCATTCCTGTTGACCAG 5173 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAA-CGATTACAG 25010 ||| | | |||| || ||||||||||||||||| | || | | || |||||| | Sbjct 5172 CAAAGACTGATATTTGGCGGCAAACAACTGGAAGA-CGAACGAGTTTTAAGCGATTATAA 5114 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGT 25040 | ||||||||||| | || ||||| ||||| Sbjct 5113 CGTACAGAAAGAGTCGACACTTCACTTAGT 5084 >seq40065 Length=761 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| ||||| || || || | | |||||||| || || | || || ||| ||| Sbjct 356 ATGCATATATTCGTGAAGACACTGAATGGCAAAACAATTACGTTAGACGTGGAACCGACA 415 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| ||| || |||||| || ||| | | ||||| || | || |||||||| Sbjct 416 GACACTGTTCAAGTGGTTAAGTCGAAGATTACCGATAAAGAGGGTTTGCCTGTTGACCAA 475 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCA-TGA-CTATGAACGATTACA 25009 ||| | |||||| ||| ||||||||||||||||| | | || ||| | ||||| | Sbjct 476 CAAAGGCTAATATTTGCCGGCAAACAACTGGAAGA--CGAGCGAGTTATCAGTGATTATA 533 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGT 25040 | |||||| ||| |||| |||||||| || Sbjct 534 CCGTACAGAGAGACTCCACACTTCATTTGGT 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417786315466400