Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq94648 120 3e-22
seq40065 91.5 1e-13
>seq94648
Length=7301
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| |||||||| || || | |||||||| || || | || || ||| |||
Sbjct 5292 ATGCAGATCTTTGTTAAGACATTGAATGGCAAAACTATTACGTTAGACGTGGAACCGACA 5233
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||||||| || || ||| ||| ||||| | ||||| || | || |||||||||
Sbjct 5232 GACAGTGTTCAACTGGTAAAGTCAAAGATTGCCGATAAAGAGAGCATTCCTGTTGACCAG 5173
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAA-CGATTACAG 25010
||| | | |||| || ||||||||||||||||| | || | | || |||||| |
Sbjct 5172 CAAAGACTGATATTTGGCGGCAAACAACTGGAAGA-CGAACGAGTTTTAAGCGATTATAA 5114
Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGT 25040
| ||||||||||| | || ||||| |||||
Sbjct 5113 CGTACAGAAAGAGTCGACACTTCACTTAGT 5084
>seq40065
Length=761
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||| ||||| || || || | | |||||||| || || | || || ||| |||
Sbjct 356 ATGCATATATTCGTGAAGACACTGAATGGCAAAACAATTACGTTAGACGTGGAACCGACA 415
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| ||| || |||||| || ||| | | ||||| || | || ||||||||
Sbjct 416 GACACTGTTCAAGTGGTTAAGTCGAAGATTACCGATAAAGAGGGTTTGCCTGTTGACCAA 475
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCA-TGA-CTATGAACGATTACA 25009
||| | |||||| ||| ||||||||||||||||| | | || ||| | ||||| |
Sbjct 476 CAAAGGCTAATATTTGCCGGCAAACAACTGGAAGA--CGAGCGAGTTATCAGTGATTATA 533
Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGT 25040
| |||||| ||| |||| |||||||| ||
Sbjct 534 CCGTACAGAGAGACTCCACACTTCATTTGGT 564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417786315466400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |