Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq94648 98.7 1e-15 seq39385 91.5 1e-13 >seq94648 Length=7301 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| | ||| | ||||||||||| || |||||||| || | |||||||||||| Sbjct 5065 GCCACCTCTGAGACGAAGAACTAAGTGAAGTGTCGACTCTTTCTGTACGTTATAATCGCT 5124 Query 139597 CATTGTGCTCG--AGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | |||| |||||| || ||||| || || | ||||| | |||||| || | Sbjct 5125 --TAAAACTCGTTCGTCTTCCAGTTGTTTGCCGCCAAATATCAGTCTTTGCTGGTCAACA 5182 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || |||| ||||| |||| || ||| |||| | ||| || |||| || || ||| Sbjct 5183 GGAATGCTCTCTTTATCGGCAATCTTTGACTTTACCAGTTGAACACTGTCTGTCGGTTCC 5242 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || | || ||||| |||| || || || || || ||||| Sbjct 5243 ACGTCTAACGTAATAGTTTTGCCATTCAATGTCTTAACAAAGATCTGCAT 5292 >seq39385 Length=5141 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 139577 TTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATC 139636 || ||||| ||||||||||| | ||| || ||||| || ||||| ||||| ||||| Sbjct 206 TTCTGAATATTATAATCGCTGAGTGTTCTTCCATCTTCCAGTTGTTTGCCAGCGAAGATC 147 Query 139637 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 || || |||||||||||||| |||||||| ||||| Sbjct 146 AGTCGCTGCTGATCGGGAGGAATGCCTTCCTTGTC 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495434339764000