Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq67252 320 2e-82
seq96803 260 1e-64
seq95739 253 2e-62
seq50692 138 1e-27
seq77187 104 2e-17
>seq67252
Length=1665
Score = 320 bits (354), Expect = 2e-82
Identities = 587/849 (69%), Gaps = 42/849 (5%)
Strand=Plus/Plus
Query 13582 TTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTT 13641
|||||||||| || ||| || |||| || || ||| | ||| || | |||||| | ||
Sbjct 498 TTTGATATTCGCTCACTTTTATTTCGAAAAAATTACTCTTATTATCAATTGATATTTGTT 557
Query 13642 CCATAAAATCAAATGGATTTATTGACATAAACACT-TTATCACAACCTAGTTCTAATAGT 13700
|||||||||||||||||||| || |||| | ||| ||| || | | | ||
Sbjct 558 CCATAAAATCAAATGGATTTTCCGA-ATAATAATGATTAATACATCCAAAATTTTTTAAA 616
Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760
| | ||||||| || || ||||| ||| |||||||||||| ||||| |||||||
Sbjct 617 AGTTTATCAGCTATGAATTCAATGTATAATTTCATTAAATCACAGTTCATTCCTATTANN 676
Query 13761 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATA 13820
|| |||||||||||||| ||| ||||| || | ||||||
Sbjct 677 NNCT--------------GTCAAAAATTCTTTTTCAATAATAACAGCTTCCTGTATAATT 722
Query 13821 ATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 13880
| || | | |||| || | ||||| || |||||| | || ||| ||||||
Sbjct 723 TTCAAGATTTTATTATTATTGGGTTTGTTTTTTAAATATTTAAATAATAGACATGCAAAA 782
Query 13881 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 13940
||||| |||||||| |||||||| |||||||||||| ||||| || |
Sbjct 783 TCACAGTGAAGGCCTTCATCTCTTGAAATAAGTTCGTTACTTTGCGTTAAACCATTTAAA 842
Query 13941 AATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCA 14000
| ||| |||| ||||| |||| | || ||||||||||| || ||| || ||||| |||
Sbjct 843 ATTCCACGTTCTTTTATCCAATAAATAGCAGCAAATGAACCACTAAAAAAAATTCCTTCA 902
Query 14001 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACG----ATGCTTTTTTGTTCGATATCCA 14056
|| |||||||| || | | || |||||||| ||| ||||| || ||||||
Sbjct 903 ACAGCAGCAAATGCCACGAGTCTCTCTCCAAAGCTAACATG-TTTTTCATT---TATCCA 958
Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
|||| |||||||| | |||||||||||| || || | | || | ||| | |||
Sbjct 959 TTTTAATGCCCATTCGGCTTTTTTTTTAATGCAACTAATATTATGGATTGAATTTATTAA 1018
Query 14117 ---ATATTCCTTCTCTTTAGTACTTGAAATGTATGTAT-CAATAAGTAAGCTATACATTT 14172
|| || || |||||| ||| || || ||||| |||||| ||| || |||||||
Sbjct 1019 GGTATTTTGTTTATCTTTAT--CTTTAA-TGAGTGTATACAATAA-TAAACTGTACATTT 1074
Query 14173 CAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCA-- 14230
| |||||||| ||||| | || || || |||||||| |||||||| ||||| || |
Sbjct 1075 CTGAGTGTATATTTTCAACTGCAATTTGCAAACCATAGAAGCATCTTGCTTC--ACTAAT 1132
Query 14231 TTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGC 14290
||| || || | |||||||||| ||||||||||| || ||||| || ||||| | |||
Sbjct 1133 TTGAACATCACATAAAAATCTTTCTGCCAAATTTTCGTTGACTATTCCGTCACTTGTTGC 1192
Query 14291 AAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT---TGAGTTTTTTCCA 14347
|||||| || | || | || ||||| | || |||||| | | || | |||
Sbjct 1193 AAAAAAAGCGAGAATATAAGAAAAAAAGTGT--CT-TTCATTTTCACTTAGAAGTAACCA 1249
Query 14348 ATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14407
||| |||| || | ||||||||| || || ||||| | || ||| | ||||||
Sbjct 1250 ATCATTGTAATCTTTTCCCAAATCTACTTCTTCCACAGTCCATATACAAGCCAAAGCTTT 1309
Query 14408 TTTATACAT 14416
|||||||||
Sbjct 1310 TTTATACAT 1318
>seq96803
Length=7468
Score = 260 bits (288), Expect = 1e-64
Identities = 623/923 (67%), Gaps = 28/923 (3%)
Strand=Plus/Minus
Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639
|||||||||||| | ||||| |||||| || || ||| |||| ||||||| ||| || |
Sbjct 4143 TTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGAAATTTG 4084
Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAG 13699
|||||||||||||| || ||| ||| ||| | ||| |||| ||| ||| | ||
Sbjct 4083 CTCCATAAAATCAAAAGGGTTTTCCGACTGAAATATTTTTGGACAATCTAATTCCATGAG 4024
Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759
| | ||||||||| | ||||| || || ||| | |||||||| || ||||
Sbjct 4023 AAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATGCCAATTAA 3964
Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819
|| || | || || |||||||| ||| || | || || ||| |||||
Sbjct 3963 ACGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAAT 3904
Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGA-TGTTT-----AAAAATTAAACA 13873
|| | || | | || || | || || ||| | ||| | || |||
Sbjct 3903 --TTCGACTATTTT-ATCCTCGCTCGGTTTGTTGCGAATGTATCGTCGAAATACTAGACA 3847
Query 13874 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 13933
|||||||||||||| | || ||||| | | ||| ||||| || ||| || || ||
Sbjct 3846 TGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGTCAAACC 3787
Query 13934 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATAT 13993
| | | ||| |||| ||| | ||||||||| | ||||| || || ||| |||||
Sbjct 3786 ACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAAAAATAT 3727
Query 13994 TCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATAT 14053
|| ||||| ||||| || || | ||| ||||| |||| || ||| || || || ||
Sbjct 3726 CCCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAAATTATTAGAAAT 3667
Query 14054 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14113
||| | ||||||| | ||||| || | | | || |||||||| ||||||||
Sbjct 3666 CCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTGCATTAAA 3607
Query 14114 TAAA--TATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATT 14171
|||| |||| |||| ||| || | ||| || || | | |||||| |||||||
Sbjct 3606 TAAAAGCATTCTTTCTTTTTTGTCAT--CAATATACGTTTGCAAAAGTAATGAATACATT 3549
Query 14172 TCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG--ACC 14229
|| || || | || || || || || ||||| ||||||||||| | ||||| | |||
Sbjct 3548 TCTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCTGTAACC 3489
Query 14230 ATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14288
|| || || || | ||||| ||| || | |||||||||||| | |||||||||||
Sbjct 3488 --TGAACCTCTCGTAT-AAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACTAGCG 3432
Query 14289 GCAAAAAATGCCAATATGT-TTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---T 14344
||||||||||| | || | ||| ||| | | || || ||| | ||| | |
Sbjct 3431 GCAAAAAATGCAAGAATATACGATAAGAAA-CGTCGTTCATCCGGGTTTAATTTATTGAT 3373
Query 14345 CCAATCGGATAAATC-CTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAG 14403
|||||| | ||| | | || ||| ||||| || ||||||||||| ||| ||
Sbjct 3372 CCAATCAGCACGATCACGTCCTAA-ATCAACTTCCTCTACTGTCCAAAATGAAGCTTGAG 3314
Query 14404 CTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCG-AA 14462
||||||| |||||| ||||| || | |||| || ||||| || ||||| | || |
Sbjct 3313 CTTTTTTGTACATTTGCCATAAATCGTAATATTCTACTGGAAACACCACAAAACGCGTGA 3254
Query 14463 GATGTTTCTTTAAGAATTGGTTC 14485
|| ||||| | || ||||||||
Sbjct 3253 CAT-TTTCTGTTAGCATTGGTTC 3232
>seq95739
Length=7868
Score = 253 bits (280), Expect = 2e-62
Identities = 623/926 (67%), Gaps = 34/926 (4%)
Strand=Plus/Plus
Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639
||||||||| || | |||| ||||||| || || || |||| ||||||| ||| ||||
Sbjct 315 TTTTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATG 374
Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATC-ACAACCTAGTTCTAATA 13698
||||||||||||||||||||| | || ||| ||| | ||| | | ||| ||||
Sbjct 375 CTCCATAAAATCAAATGGATTT-TCCACGCAAAATATTTTTGGACATTCCAATTC-AATA 432
Query 13699 GTAATCT-ATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13757
|| || ||| |||| ||| ||||| || || ||| | ||||||||| || |||
Sbjct 433 AGAAGCTTATCGGCAACAAATTCAATGTACTGTTTCATAAGCGAACAATTCATGCCGATT 492
Query 13758 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATA 13817
| || || | | || ||| |||||||| ||| || | || || ||| |||
Sbjct 493 AAAGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATA 552
Query 13818 ATAATTGTAATAATCTCATTAGAAGGA-------GGATATTTTAGATGTTTAAAAATTAA 13870
|| |||| |||| | ||| |||||| | || | ||| | ||
Sbjct 553 ATTTCGCTAATTTTCTCTTGGCTAGGTTTGTAGCGGATATATC-GACG---AAATACTAG 608
Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930
||| ||||| ||||| || || || ||||| | | || | ||| || ||| || ||
Sbjct 609 ACATGCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGCTAAAAGTCAA 668
Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990
|| | || | || |||| ||| | ||||||||| || ||||| || || || ||
Sbjct 669 ACCAGACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAACCACTGAAAAA 728
Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14050
||| || || || |||||||| || | ||| ||||| |||||| || | | | ||
Sbjct 729 TATACCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGAATCTGTACTACTTGA 788
Query 14051 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14110
||||| | | ||| | || |||| || | | | || |||||| || |||||
Sbjct 789 AATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAATGTTTCGATTGCATT 848
Query 14111 AAATAAAT--ATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14168
||||||| | | || | | | | | ||||||||| | | ||| | | ||||
Sbjct 849 AAATAAAAGCAAACGTTGTTCGTTGCAATC--AATGTATGTTTGCAAAAGCATGGAATAC 906
Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG-- 14226
||||| || || | ||||| || || || ||||| |||||||| || | ||||| |
Sbjct 907 ATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAACAACGTGCTTCTGTA 966
Query 14227 ACCATTGTACTTCCGAGTA-AAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285
||| || || || ||| ||||| ||| || | |||||||||||| || ||||||||
Sbjct 967 ACC--TGAACCTCTC-GTATAAATCGTTCTGCGAGATTTTCATTAACAATTCCATCACTT 1023
Query 14286 GCTGCAAAAAATGCCA--ATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14343
|| ||||||||||| | |||| | | || || || ||||| || ||| | ||| |
Sbjct 1024 GCGGCAAAAAATGCGAGAATATATGATAAAAAACGT--TGCTCATCCGCGTTCAATTTGT 1081
Query 14344 T---CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400
| |||||| || ||| |||||| || || || ||||||||||| |||
Sbjct 1082 TATTCCAATCAAATCGATCACGTCCAAGATCAACCTCCTCTACTGTCCAAAACGAAGCTT 1141
Query 14401 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCG 14460
|| ||||||||||||| ||||| || | ||| || ||||| || ||||| | ||
Sbjct 1142 GAGATTTTTTATACATTTGCCATAAATCGTAATACTCAATTGGAAACACAACAAAACGCG 1201
Query 14461 AAGAT-GTTTCTTTAAGAATTGGTTC 14485
|||| ||||||| || ||||||||
Sbjct 1202 -AGATATTTTCTTTTAGCATTGGTTC 1226
>seq50692
Length=412
Score = 138 bits (152), Expect = 1e-27
Identities = 287/417 (69%), Gaps = 18/417 (4%)
Strand=Plus/Plus
Query 13985 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044
||| || ||||| ||||| |||||||| || | ||||| ||||||||| || ||
Sbjct 3 AAAAAAAATTCCTTCAACAGCAGCAAAGGCAACTAATCTTTCTCCAAA--ATTAATTGAA 60
Query 14045 GTTCGAT--ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102
||| | ||||| | |||||| | ||||||| ||||| | || | |||||
Sbjct 61 CTTCCTTTAATCCAAGACAATGACCATTCTGCTTTTTTTCTAATACAGTCAAAATTTTCA 120
Query 14103 ATAGCATTAAATAAA-TATTCCTTCTCTTTAGTACTT--GAAATGTATGTATCAATAAGT 14159
|| || || | ||| |||| ||| |||| | | | | || | || | | ||||
Sbjct 121 ATTGCGTTTATCAAAATATTTCTT---TTTAATTCGTCTGTTATAAAAGTTTGTAAAAGT 177
Query 14160 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA----AGCA 14215
|| ||||||||||||| ||| | ||||| || || || ||||||||||||| | ||
Sbjct 178 AAACTATACATTTCAGCGTGAACATTTTCAATTGCAATTTGAAAACCATAAANAAAAACA 237
Query 14216 TCTAGCTTCCGACCATTGT-ACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTA 14274
| |||||| | ||| | || || ||||||||||||| || ||||| || || |
Sbjct 238 ACGAGCTTC-GTTTATTTTGACATCTCTTAAAAATCTTTCGGCTAAGTTTTCGTTTACAA 296
Query 14275 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTG 14333
| |||||||| | ||||| || || | ||||| | ||||| ||| || || || |
Sbjct 297 TTCCATCACTTGTGGCAAAGAAAGCAAGTATGTGAGACAAAAAGTTTTGTTCATTTATAG 356
Query 14334 TTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14390
|| || ||| |||||| | ||||| ||| | ||| | || ||||||||||||
Sbjct 357 TT-AGACTTTGCCAATCAGTCAAATCTTTACTTAAATCAATCTCTTCAACTGTCCAA 412
>seq77187
Length=4015
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316
|||||||||||||||| || |||||||| || || || || || | | || | || |
Sbjct 1824 CCAAATTTTCATTAACAATGCCATCACTTGCGGCGAAGAACGCGAGAACGTGTGATATGA 1765
Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376
||| |||| | || | ||| | ||||| || |||||| | || || || |
Sbjct 1764 AGTGACGCTCGCCTTTACTCAGTGTCTTCCAGTCACTCAAATCCCTTCCGAGGTCCACCT 1705
Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436
| || |||||||| || || ||||||| |||||||| |||||| || | ||||
Sbjct 1704 CTTCCACTGTCCAGAACGATGCCTCAGCTTTCTTATACATCTGCCATATATCGTGATATT 1645
Query 14437 ATATAGGAAAAACTACAAATCTCGAAGATGTTTCTTTAAGAATTGGTTCC 14486
|||||||| |||||||| | ||| | ||||||| |||| ||||||
Sbjct 1644 GAATAGGAAACACTACAAACCGCGACGGATTTTCTTTGAGAAGCGGTTCC 1595
Score = 104 bits (114), Expect = 2e-17
Identities = 203/298 (68%), Gaps = 4/298 (1%)
Strand=Plus/Minus
Query 13674 ACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGAC 13733
|||||| ||| || | ||| | || | ||| || |||| | ||||| || |
Sbjct 3258 ACTTTAGGACATCCCAATTCAAGGAGCAGTCTGTCCGCAACGTATTCAATGTAAGTTTTC 3199
Query 13734 ATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTT 13793
||||| || |||||||| || || || || || || | || |||||| ||||| | |
Sbjct 3198 ATTAATTCGCAATTCATTCCAATGAGATTCACGGGCAACGCATCGGTTAAGAATTCCTGT 3139
Query 13794 TCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT 13853
|||||| ||| ||||| || ||||| ||| | ||| || | | | || |
Sbjct 3138 TCTATAAGCACCGCCTCCTTAATAAT--TTGGGCGACTCTTTCCTGATAGGGCTTGTTCT 3081
Query 13854 AGATGT--TTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAA 13911
||||| || || | |||||||||||||| |||||||| || || || | ||| |
Sbjct 3080 CGATGTACTTGAACAGCAAACACGCAAAATCGCAATGAAGCCCTTCGTCGCGCGAAATCA 3021
Query 13912 GTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGC 13969
|||| || || ||||| || ||||| | |||||| ||||| | ||||||||| ||
Sbjct 3020 GTTCATTGCTGAACGTTAAACCAGGCATAAGTCCTCGCTTTTTGAGCCAAAATATGGC 2963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479119075253000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |