Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq67252 320 2e-82 seq96803 260 1e-64 seq95739 253 2e-62 seq50692 138 1e-27 seq77187 104 2e-17 >seq67252 Length=1665 Score = 320 bits (354), Expect = 2e-82 Identities = 587/849 (69%), Gaps = 42/849 (5%) Strand=Plus/Plus Query 13582 TTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTT 13641 |||||||||| || ||| || |||| || || ||| | ||| || | |||||| | || Sbjct 498 TTTGATATTCGCTCACTTTTATTTCGAAAAAATTACTCTTATTATCAATTGATATTTGTT 557 Query 13642 CCATAAAATCAAATGGATTTATTGACATAAACACT-TTATCACAACCTAGTTCTAATAGT 13700 |||||||||||||||||||| || |||| | ||| ||| || | | | || Sbjct 558 CCATAAAATCAAATGGATTTTCCGA-ATAATAATGATTAATACATCCAAAATTTTTTAAA 616 Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760 | | ||||||| || || ||||| ||| |||||||||||| ||||| ||||||| Sbjct 617 AGTTTATCAGCTATGAATTCAATGTATAATTTCATTAAATCACAGTTCATTCCTATTANN 676 Query 13761 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATA 13820 || |||||||||||||| ||| ||||| || | |||||| Sbjct 677 NNCT--------------GTCAAAAATTCTTTTTCAATAATAACAGCTTCCTGTATAATT 722 Query 13821 ATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 13880 | || | | |||| || | ||||| || |||||| | || ||| |||||| Sbjct 723 TTCAAGATTTTATTATTATTGGGTTTGTTTTTTAAATATTTAAATAATAGACATGCAAAA 782 Query 13881 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 13940 ||||| |||||||| |||||||| |||||||||||| ||||| || | Sbjct 783 TCACAGTGAAGGCCTTCATCTCTTGAAATAAGTTCGTTACTTTGCGTTAAACCATTTAAA 842 Query 13941 AATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCA 14000 | ||| |||| ||||| |||| | || ||||||||||| || ||| || ||||| ||| Sbjct 843 ATTCCACGTTCTTTTATCCAATAAATAGCAGCAAATGAACCACTAAAAAAAATTCCTTCA 902 Query 14001 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACG----ATGCTTTTTTGTTCGATATCCA 14056 || |||||||| || | | || |||||||| ||| ||||| || |||||| Sbjct 903 ACAGCAGCAAATGCCACGAGTCTCTCTCCAAAGCTAACATG-TTTTTCATT---TATCCA 958 Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 |||| |||||||| | |||||||||||| || || | | || | ||| | ||| Sbjct 959 TTTTAATGCCCATTCGGCTTTTTTTTTAATGCAACTAATATTATGGATTGAATTTATTAA 1018 Query 14117 ---ATATTCCTTCTCTTTAGTACTTGAAATGTATGTAT-CAATAAGTAAGCTATACATTT 14172 || || || |||||| ||| || || ||||| |||||| ||| || ||||||| Sbjct 1019 GGTATTTTGTTTATCTTTAT--CTTTAA-TGAGTGTATACAATAA-TAAACTGTACATTT 1074 Query 14173 CAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCA-- 14230 | |||||||| ||||| | || || || |||||||| |||||||| ||||| || | Sbjct 1075 CTGAGTGTATATTTTCAACTGCAATTTGCAAACCATAGAAGCATCTTGCTTC--ACTAAT 1132 Query 14231 TTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGC 14290 ||| || || | |||||||||| ||||||||||| || ||||| || ||||| | ||| Sbjct 1133 TTGAACATCACATAAAAATCTTTCTGCCAAATTTTCGTTGACTATTCCGTCACTTGTTGC 1192 Query 14291 AAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT---TGAGTTTTTTCCA 14347 |||||| || | || | || ||||| | || |||||| | | || | ||| Sbjct 1193 AAAAAAAGCGAGAATATAAGAAAAAAAGTGT--CT-TTCATTTTCACTTAGAAGTAACCA 1249 Query 14348 ATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14407 ||| |||| || | ||||||||| || || ||||| | || ||| | |||||| Sbjct 1250 ATCATTGTAATCTTTTCCCAAATCTACTTCTTCCACAGTCCATATACAAGCCAAAGCTTT 1309 Query 14408 TTTATACAT 14416 ||||||||| Sbjct 1310 TTTATACAT 1318 >seq96803 Length=7468 Score = 260 bits (288), Expect = 1e-64 Identities = 623/923 (67%), Gaps = 28/923 (3%) Strand=Plus/Minus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 |||||||||||| | ||||| |||||| || || ||| |||| ||||||| ||| || | Sbjct 4143 TTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGAAATTTG 4084 Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||||||||| || ||| ||| ||| | ||| |||| ||| ||| | || Sbjct 4083 CTCCATAAAATCAAAAGGGTTTTCCGACTGAAATATTTTTGGACAATCTAATTCCATGAG 4024 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 | | ||||||||| | ||||| || || ||| | |||||||| || |||| Sbjct 4023 AAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATGCCAATTAA 3964 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 || || | || || |||||||| ||| || | || || ||| ||||| Sbjct 3963 ACGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAAT 3904 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGA-TGTTT-----AAAAATTAAACA 13873 || | || | | || || | || || ||| | ||| | || ||| Sbjct 3903 --TTCGACTATTTT-ATCCTCGCTCGGTTTGTTGCGAATGTATCGTCGAAATACTAGACA 3847 Query 13874 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 13933 |||||||||||||| | || ||||| | | ||| ||||| || ||| || || || Sbjct 3846 TGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGTCAAACC 3787 Query 13934 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATAT 13993 | | | ||| |||| ||| | ||||||||| | ||||| || || ||| ||||| Sbjct 3786 ACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAAAAATAT 3727 Query 13994 TCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATAT 14053 || ||||| ||||| || || | ||| ||||| |||| || ||| || || || || Sbjct 3726 CCCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAAATTATTAGAAAT 3667 Query 14054 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14113 ||| | ||||||| | ||||| || | | | || |||||||| |||||||| Sbjct 3666 CCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTGCATTAAA 3607 Query 14114 TAAA--TATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATT 14171 |||| |||| |||| ||| || | ||| || || | | |||||| ||||||| Sbjct 3606 TAAAAGCATTCTTTCTTTTTTGTCAT--CAATATACGTTTGCAAAAGTAATGAATACATT 3549 Query 14172 TCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG--ACC 14229 || || || | || || || || || ||||| ||||||||||| | ||||| | ||| Sbjct 3548 TCTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCTGTAACC 3489 Query 14230 ATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14288 || || || || | ||||| ||| || | |||||||||||| | ||||||||||| Sbjct 3488 --TGAACCTCTCGTAT-AAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACTAGCG 3432 Query 14289 GCAAAAAATGCCAATATGT-TTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT---T 14344 ||||||||||| | || | ||| ||| | | || || ||| | ||| | | Sbjct 3431 GCAAAAAATGCAAGAATATACGATAAGAAA-CGTCGTTCATCCGGGTTTAATTTATTGAT 3373 Query 14345 CCAATCGGATAAATC-CTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAG 14403 |||||| | ||| | | || ||| ||||| || ||||||||||| ||| || Sbjct 3372 CCAATCAGCACGATCACGTCCTAA-ATCAACTTCCTCTACTGTCCAAAATGAAGCTTGAG 3314 Query 14404 CTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCG-AA 14462 ||||||| |||||| ||||| || | |||| || ||||| || ||||| | || | Sbjct 3313 CTTTTTTGTACATTTGCCATAAATCGTAATATTCTACTGGAAACACCACAAAACGCGTGA 3254 Query 14463 GATGTTTCTTTAAGAATTGGTTC 14485 || ||||| | || |||||||| Sbjct 3253 CAT-TTTCTGTTAGCATTGGTTC 3232 >seq95739 Length=7868 Score = 253 bits (280), Expect = 2e-62 Identities = 623/926 (67%), Gaps = 34/926 (4%) Strand=Plus/Plus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||||||||| || | |||| ||||||| || || || |||| ||||||| ||| |||| Sbjct 315 TTTTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATG 374 Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATC-ACAACCTAGTTCTAATA 13698 ||||||||||||||||||||| | || ||| ||| | ||| | | ||| |||| Sbjct 375 CTCCATAAAATCAAATGGATTT-TCCACGCAAAATATTTTTGGACATTCCAATTC-AATA 432 Query 13699 GTAATCT-ATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13757 || || ||| |||| ||| ||||| || || ||| | ||||||||| || ||| Sbjct 433 AGAAGCTTATCGGCAACAAATTCAATGTACTGTTTCATAAGCGAACAATTCATGCCGATT 492 Query 13758 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATA 13817 | || || | | || ||| |||||||| ||| || | || || ||| ||| Sbjct 493 AAAGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATA 552 Query 13818 ATAATTGTAATAATCTCATTAGAAGGA-------GGATATTTTAGATGTTTAAAAATTAA 13870 || |||| |||| | ||| |||||| | || | ||| | || Sbjct 553 ATTTCGCTAATTTTCTCTTGGCTAGGTTTGTAGCGGATATATC-GACG---AAATACTAG 608 Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| ||||| ||||| || || || ||||| | | || | ||| || ||| || || Sbjct 609 ACATGCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGCTAAAAGTCAA 668 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990 || | || | || |||| ||| | ||||||||| || ||||| || || || || Sbjct 669 ACCAGACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAACCACTGAAAAA 728 Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14050 ||| || || || |||||||| || | ||| ||||| |||||| || | | | || Sbjct 729 TATACCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGAATCTGTACTACTTGA 788 Query 14051 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14110 ||||| | | ||| | || |||| || | | | || |||||| || ||||| Sbjct 789 AATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAATGTTTCGATTGCATT 848 Query 14111 AAATAAAT--ATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14168 ||||||| | | || | | | | | ||||||||| | | ||| | | |||| Sbjct 849 AAATAAAAGCAAACGTTGTTCGTTGCAATC--AATGTATGTTTGCAAAAGCATGGAATAC 906 Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG-- 14226 ||||| || || | ||||| || || || ||||| |||||||| || | ||||| | Sbjct 907 ATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAACAACGTGCTTCTGTA 966 Query 14227 ACCATTGTACTTCCGAGTA-AAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 ||| || || || ||| ||||| ||| || | |||||||||||| || |||||||| Sbjct 967 ACC--TGAACCTCTC-GTATAAATCGTTCTGCGAGATTTTCATTAACAATTCCATCACTT 1023 Query 14286 GCTGCAAAAAATGCCA--ATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14343 || ||||||||||| | |||| | | || || || ||||| || ||| | ||| | Sbjct 1024 GCGGCAAAAAATGCGAGAATATATGATAAAAAACGT--TGCTCATCCGCGTTCAATTTGT 1081 Query 14344 T---CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400 | |||||| || ||| |||||| || || || ||||||||||| ||| Sbjct 1082 TATTCCAATCAAATCGATCACGTCCAAGATCAACCTCCTCTACTGTCCAAAACGAAGCTT 1141 Query 14401 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCG 14460 || ||||||||||||| ||||| || | ||| || ||||| || ||||| | || Sbjct 1142 GAGATTTTTTATACATTTGCCATAAATCGTAATACTCAATTGGAAACACAACAAAACGCG 1201 Query 14461 AAGAT-GTTTCTTTAAGAATTGGTTC 14485 |||| ||||||| || |||||||| Sbjct 1202 -AGATATTTTCTTTTAGCATTGGTTC 1226 >seq50692 Length=412 Score = 138 bits (152), Expect = 1e-27 Identities = 287/417 (69%), Gaps = 18/417 (4%) Strand=Plus/Plus Query 13985 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044 ||| || ||||| ||||| |||||||| || | ||||| ||||||||| || || Sbjct 3 AAAAAAAATTCCTTCAACAGCAGCAAAGGCAACTAATCTTTCTCCAAA--ATTAATTGAA 60 Query 14045 GTTCGAT--ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102 ||| | ||||| | |||||| | ||||||| ||||| | || | ||||| Sbjct 61 CTTCCTTTAATCCAAGACAATGACCATTCTGCTTTTTTTCTAATACAGTCAAAATTTTCA 120 Query 14103 ATAGCATTAAATAAA-TATTCCTTCTCTTTAGTACTT--GAAATGTATGTATCAATAAGT 14159 || || || | ||| |||| ||| |||| | | | | || | || | | |||| Sbjct 121 ATTGCGTTTATCAAAATATTTCTT---TTTAATTCGTCTGTTATAAAAGTTTGTAAAAGT 177 Query 14160 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA----AGCA 14215 || ||||||||||||| ||| | ||||| || || || ||||||||||||| | || Sbjct 178 AAACTATACATTTCAGCGTGAACATTTTCAATTGCAATTTGAAAACCATAAANAAAAACA 237 Query 14216 TCTAGCTTCCGACCATTGT-ACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTA 14274 | |||||| | ||| | || || ||||||||||||| || ||||| || || | Sbjct 238 ACGAGCTTC-GTTTATTTTGACATCTCTTAAAAATCTTTCGGCTAAGTTTTCGTTTACAA 296 Query 14275 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTG 14333 | |||||||| | ||||| || || | ||||| | ||||| ||| || || || | Sbjct 297 TTCCATCACTTGTGGCAAAGAAAGCAAGTATGTGAGACAAAAAGTTTTGTTCATTTATAG 356 Query 14334 TTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14390 || || ||| |||||| | ||||| ||| | ||| | || |||||||||||| Sbjct 357 TT-AGACTTTGCCAATCAGTCAAATCTTTACTTAAATCAATCTCTTCAACTGTCCAA 412 >seq77187 Length=4015 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 |||||||||||||||| || |||||||| || || || || || | | || | || | Sbjct 1824 CCAAATTTTCATTAACAATGCCATCACTTGCGGCGAAGAACGCGAGAACGTGTGATATGA 1765 Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376 ||| |||| | || | ||| | ||||| || |||||| | || || || | Sbjct 1764 AGTGACGCTCGCCTTTACTCAGTGTCTTCCAGTCACTCAAATCCCTTCCGAGGTCCACCT 1705 Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436 | || |||||||| || || ||||||| |||||||| |||||| || | |||| Sbjct 1704 CTTCCACTGTCCAGAACGATGCCTCAGCTTTCTTATACATCTGCCATATATCGTGATATT 1645 Query 14437 ATATAGGAAAAACTACAAATCTCGAAGATGTTTCTTTAAGAATTGGTTCC 14486 |||||||| |||||||| | ||| | ||||||| |||| |||||| Sbjct 1644 GAATAGGAAACACTACAAACCGCGACGGATTTTCTTTGAGAAGCGGTTCC 1595 Score = 104 bits (114), Expect = 2e-17 Identities = 203/298 (68%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 13674 ACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGAC 13733 |||||| ||| || | ||| | || | ||| || |||| | ||||| || | Sbjct 3258 ACTTTAGGACATCCCAATTCAAGGAGCAGTCTGTCCGCAACGTATTCAATGTAAGTTTTC 3199 Query 13734 ATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTT 13793 ||||| || |||||||| || || || || || || | || |||||| ||||| | | Sbjct 3198 ATTAATTCGCAATTCATTCCAATGAGATTCACGGGCAACGCATCGGTTAAGAATTCCTGT 3139 Query 13794 TCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT 13853 |||||| ||| ||||| || ||||| ||| | ||| || | | | || | Sbjct 3138 TCTATAAGCACCGCCTCCTTAATAAT--TTGGGCGACTCTTTCCTGATAGGGCTTGTTCT 3081 Query 13854 AGATGT--TTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAA 13911 ||||| || || | |||||||||||||| |||||||| || || || | ||| | Sbjct 3080 CGATGTACTTGAACAGCAAACACGCAAAATCGCAATGAAGCCCTTCGTCGCGCGAAATCA 3021 Query 13912 GTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGC 13969 |||| || || ||||| || ||||| | |||||| ||||| | ||||||||| || Sbjct 3020 GTTCATTGCTGAACGTTAAACCAGGCATAAGTCCTCGCTTTTTGAGCCAAAATATGGC 2963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479119075253000